RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 I3L4J1 428 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 DAPK3O43293 454 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 PSMC2P35998 433 aaKnown RBP15.89■□□□□ 0.13
VPS36-207ENST00000611132 CYP4A11Q02928 519 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 TRIM28Q13263 835 aaKnown RBP15.89■□□□□ 0.13
VPS36-207ENST00000611132 ARL8AQ96BM9 186 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 CYFIP2Q96F07 1278 aa15.89■□□□□ 0.13
VPS36-207ENST00000611132 DMGDHQ9UI17 866 aaKnown RBP15.89■□□□□ 0.13
VPS36-207ENST00000611132 NDC80O14777 642 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 BACH1O14867 736 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 PLA2G4BP0C869 781 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 STRN3Q13033 797 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 HLFQ16534 295 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 USH1GQ495M9 461 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 GIMAP8Q8ND71 665 aaPredicted RBP15.88■□□□□ 0.13
VPS36-207ENST00000611132 VCX3BQ9H321 246 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 EXOC7Q9UPT5 735 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 DIS3Q9Y2L1 958 aaKnown RBP15.88■□□□□ 0.13
VPS36-207ENST00000611132 hCG_1984214I3L0E3 225 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 PODXLO00592 558 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 NMT2O60551 498 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 MAN1A1P33908 653 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 USP17L2Q6R6M4 530 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 OTUD6AQ7L8S5 288 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 ZNF713Q8N859 430 aaPredicted RBP15.88■□□□□ 0.13
VPS36-207ENST00000611132 FERMT1Q9BQL6 677 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 LACRTQ9GZZ8 138 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 NOC2LQ9Y3T9 749 aaKnown RBP15.88■□□□□ 0.13
VPS36-207ENST00000611132 WDR17Q8IZU2 1322 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 IFNB1P01574 187 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 TFRCP02786 760 aaKnown RBP15.88■□□□□ 0.13
VPS36-207ENST00000611132 RASIP1Q5U651 963 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 TMC4Q7Z404 712 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 GDAP1Q8TB36 358 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 SLC40A1Q9NP59 571 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 USP17L3A6NCW0 530 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 USP17L4A6NCW7 530 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 ERVV-1B6SEH8 477 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 SARSP49591 514 aaKnown RBP15.88■□□□□ 0.13
VPS36-207ENST00000611132 PMS2P54278 862 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 KDM7AQ6ZMT4 941 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 USP17L1Q7RTZ2 530 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 KSR1Q8IVT5 923 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 SRBD1Q8N5C6 995 aaKnown RBP15.88■□□□□ 0.13
VPS36-207ENST00000611132 CCDC110Q8TBZ0 833 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 DYNLL2Q96FJ2 89 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 TSNARE1Q96NA8 513 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 AMACRQ9UHK6 382 aa15.88■□□□□ 0.13
VPS36-207ENST00000611132 A0A1W2PQJ5 194 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 CLIC2O15247 247 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 AARSP49588 968 aaKnown RBP eCLIP15.87■□□□□ 0.13
VPS36-207ENST00000611132 NT5C2P49902 561 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 SGO2Q562F6 1265 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 NT5DC1Q5TFE4 455 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 MSL3Q8N5Y2 521 aaKnown RBP15.87■□□□□ 0.13
VPS36-207ENST00000611132 COA7Q96BR5 231 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 TCHPQ9BT92 498 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 TPX2Q9ULW0 747 aaKnown RBP15.87■□□□□ 0.13
VPS36-207ENST00000611132 LRRN2O75325 713 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 HDLBPQ00341 1268 aaKnown RBP15.87■□□□□ 0.13
VPS36-207ENST00000611132 MYL7Q01449 175 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 KCNH2Q12809 1159 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 CAPN12Q6ZSI9 719 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 PPM1KQ8N3J5 372 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 SEC16BQ96JE7 1060 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 TBK1Q9UHD2 729 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 STK4Q13043 487 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 CCDC24Q8N4L8 307 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 RTCBQ9Y3I0 505 aaKnown RBP15.87■□□□□ 0.13
VPS36-207ENST00000611132 RABGAP1Q9Y3P9 1069 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 POC1B-GALNT4F8VUJ3 575 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 ASPRV1Q53RT3 343 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 SUGP1Q8IWZ8 645 aaKnown RBP15.87■□□□□ 0.13
VPS36-207ENST00000611132 MYCBPAPQ8TBZ2 947 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.87■□□□□ 0.13
VPS36-207ENST00000611132 SPDL1Q96EA4 605 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 AZI2Q9H6S1 392 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 EPB41L4AQ9HCS5 686 aaPredicted RBP15.87■□□□□ 0.13
VPS36-207ENST00000611132 DUSP10Q9Y6W6 482 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 OVOS2A0A0G2JMS6 1433 aa15.87■□□□□ 0.13
VPS36-207ENST00000611132 KLK7P49862 253 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 LLGL1Q15334 1064 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 CDC37Q16543 378 aaPredicted RBP15.86■□□□□ 0.13
VPS36-207ENST00000611132 THOC1Q96FV9 657 aaKnown RBP15.86■□□□□ 0.13
VPS36-207ENST00000611132 POTEMA6NI47 508 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 RPS6KA5O75582 802 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 ACSL3O95573 720 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 BYSLQ13895 437 aaKnown RBP15.86■□□□□ 0.13
VPS36-207ENST00000611132 SLC18A3Q16572 532 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 SGSM3Q96HU1 749 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 ERGIC2Q96RQ1 377 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 INTS13Q9NVM9 706 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 LARSQ9P2J5 1176 aaKnown RBP15.86■□□□□ 0.13
VPS36-207ENST00000611132 PLAGL2Q9UPG8 496 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 XDHP47989 1333 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 TXNDC9O14530 226 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 PRLRP16471 622 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 HERVK_113P62684 666 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 MECOMQ03112 1051 aa15.86■□□□□ 0.13
VPS36-207ENST00000611132 ITIH3Q06033 890 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms