RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 STAM2O75886 525 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 PARNO95453 639 aaKnown RBP10.63□□□□□ -0.71
FARP1-226ENST00000599040 BMP15O95972 392 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 TGFB3P10600 412 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 CYP2C9P11712 490 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 MYCLP12524 364 aaPredicted RBP10.63□□□□□ -0.71
FARP1-226ENST00000599040 NAPAP54920 295 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 ARHGAP1Q07960 439 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 STK38Q15208 465 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 PTGISQ16647 500 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 KLHL40Q2TBA0 621 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 RILPL1Q5EBL4 403 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 PPP1R18Q6NYC8 613 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 HEATR3Q7Z4Q2 680 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 SESTD1Q86VW0 696 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 NOSTRINQ8IVI9 506 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 DHX37Q8IY37 1157 aaKnown RBP10.63□□□□□ -0.71
FARP1-226ENST00000599040 PPTC7Q8NI37 304 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 KCNG4Q8TDN1 519 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 AFAP1L1Q8TED9 768 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 CUL5Q93034 780 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 PIGSQ96S52 555 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 PDCD2LQ9BRP1 358 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 SLC28A3Q9HAS3 691 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 DDX41Q9UJV9 622 aaKnown RBP10.63□□□□□ -0.71
FARP1-226ENST00000599040 BAZ2BQ9UIF8 2168 aaKnown RBP10.63□□□□□ -0.71
FARP1-226ENST00000599040 CHD9Q3L8U1 2897 aa10.63□□□□□ -0.71
FARP1-226ENST00000599040 TANC1Q9C0D5 1861 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 DTNBO60941 627 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 YEATS4O95619 227 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 U2AF2P26368 475 aaKnown RBP eCLIP10.62□□□□□ -0.717e-7■■□□□ 14.5
FARP1-226ENST00000599040 FUT2Q10981 343 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 GRIN2CQ14957 1233 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 MYSM1Q5VVJ2 828 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 MCTP2Q6DN12 878 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 VSIG10LQ86VR7 867 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 C7orf31Q8N865 590 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 PIBF1Q8WXW3 757 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 SCLYQ96I15 445 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 SLC9A7Q96T83 725 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 PHF20Q9BVI0 1012 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 FTOQ9C0B1 505 aaKnown RBP eCLIP10.62□□□□□ -0.71
FARP1-226ENST00000599040 LMBRD1Q9NUN5 540 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 BARHL2Q9NY43 387 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 VPS54Q9P1Q0 977 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 VCANP13611 3396 aa10.62□□□□□ -0.71
FARP1-226ENST00000599040 MYH7BA7E2Y1 1941 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 MYH15Q9Y2K3 1946 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 CCDC194A0A1B0GVG4 234 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 GRXCR1A8MXD5 290 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 OPLAHO14841 1288 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 PPP1R11O60927 126 aaPredicted RBP10.61□□□□□ -0.71
FARP1-226ENST00000599040 PPFIA4O75335 1185 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 BAIAP3O94812 1187 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 IQCF3P0C7M6 154 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 ATP2A2P16615 1042 aaKnown RBP10.61□□□□□ -0.71
FARP1-226ENST00000599040 HOXA13P31271 388 aaPredicted RBP10.61□□□□□ -0.71
FARP1-226ENST00000599040 PBX2P40425 430 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 PGM5Q15124 567 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 DEFB128Q7Z7B8 93 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 FCHSD1Q86WN1 690 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 TEX2Q8IWB9 1127 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 PHOSPHO2Q8TCD6 241 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 MLXIPQ9HAP2 919 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 RTEL1Q9NZ71 1219 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 CXXC1Q9P0U4 656 aaPredicted RBP10.61□□□□□ -0.71
FARP1-226ENST00000599040 KCNJ14Q9UNX9 436 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 PCDHA11Q9Y5I1 949 aa10.61□□□□□ -0.71
FARP1-226ENST00000599040 hCG_1642624A0A1W2PR95 340 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 KIF28PB7ZC32 967 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 NOP56O00567 594 aaKnown RBP10.6□□□□□ -0.71
FARP1-226ENST00000599040 LETM1O95202 739 aaPredicted RBP10.6□□□□□ -0.71
FARP1-226ENST00000599040 GGPS1O95749 300 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 F2P00734 622 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 KCNJ6P48051 423 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 ME1P48163 572 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 TRAPPC10P48553 1259 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 PSEN2P49810 448 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 NEDD9Q14511 834 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 MFSD10Q14728 455 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 PKN1Q16512 942 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 CELF3Q5SZQ8 465 aaKnown RBP10.6□□□□□ -0.71
FARP1-226ENST00000599040 PPP2R2DQ66LE6 453 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 XRRA1Q6P2D8 792 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 CCDC73Q6ZRK6 1079 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 BLIDQ8IZY5 108 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 LEO1Q8WVC0 666 aaPredicted RBP10.6□□□□□ -0.71
FARP1-226ENST00000599040 SYMPKQ92797 1274 aaKnown RBP10.6□□□□□ -0.71
FARP1-226ENST00000599040 SPATA33Q96N06 139 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 AIFM3Q96NN9 605 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 NKX2-4Q9H2Z4 354 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 TFIP11Q9UBB9 837 aaKnown RBP10.6□□□□□ -0.71
FARP1-226ENST00000599040 GTF2IRD1Q9UHL9 959 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 PCDHA4Q9UN74 947 aa10.6□□□□□ -0.71
FARP1-226ENST00000599040 GBF1Q92538 1859 aa10.59□□□□□ -0.71
FARP1-226ENST00000599040 CHD7Q9P2D1 2997 aa10.59□□□□□ -0.71
FARP1-226ENST00000599040 TRIP12Q14669 1992 aaPredicted RBP10.59□□□□□ -0.71
FARP1-226ENST00000599040 SCN5AQ14524 2016 aa10.59□□□□□ -0.71
FARP1-226ENST00000599040 ESYT2A0FGR8 921 aa10.59□□□□□ -0.71
FARP1-226ENST00000599040 BTBD18B2RXH4 712 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms