RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SLC43A3Q8NBI5 491 aa22.26■■□□□ 1.15
SHKBP1-214ENST00000597396 KAT2BQ92831 832 aa22.26■■□□□ 1.15
SHKBP1-214ENST00000597396 DNAH12Q6ZR08 3092 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 GSTTP1A0A1W2PQM5 241 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 SLC37A4O43826 429 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 HSP90AA1P07900 732 aaKnown RBP22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 ATP2B1P20020 1258 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 ACTR2P61160 394 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 KIAA0753Q2KHM9 967 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 LRCH2Q5VUJ6 765 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 ANKRD33Q7Z3H0 272 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 NOSTRINQ8IVI9 506 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 PPP1R13LQ8WUF5 828 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 SLC5A5Q92911 643 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 TOX2Q96NM4 488 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 C16orf70Q9BSU1 422 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 TEKT3Q9BXF9 490 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 PRO3102Q9H379 93 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 PRKAG2Q9UGJ0 569 aa22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 ZNF215Q9UL58 517 aaPredicted RBP22.25■■□□□ 1.15
SHKBP1-214ENST00000597396 KIF28PB7ZC32 967 aa22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 H3BRB1 525 aa22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 DHX15O43143 795 aaKnown RBP22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 MARCH6O60337 910 aa22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 GAS7O60861 476 aa22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 PDCP20941 246 aa22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 KRT76Q01546 638 aa22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 NFRKBQ6P4R8 1299 aa22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 TRIM50Q86XT4 487 aa22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 RIT2Q99578 217 aa22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 TUT1Q9H6E5 874 aaKnown RBP22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 PRDM5Q9NQX1 630 aaPredicted RBP22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 ZMYND8Q9ULU4 1186 aaPredicted RBP22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 NOL7Q9UMY1 257 aaKnown RBP22.24■■□□□ 1.15
SHKBP1-214ENST00000597396 CLTBP09497 229 aa22.23■■□□□ 1.15
SHKBP1-214ENST00000597396 PTPN11Q06124 597 aaPredicted RBP22.23■■□□□ 1.15
SHKBP1-214ENST00000597396 ZNF746Q6NUN9 644 aaPredicted RBP22.23■■□□□ 1.15
SHKBP1-214ENST00000597396 FAM126BQ8IXS8 530 aa22.23■■□□□ 1.15
SHKBP1-214ENST00000597396 C7orf31Q8N865 590 aa22.23■■□□□ 1.15
SHKBP1-214ENST00000597396 GLG1Q92896 1179 aa22.23■■□□□ 1.15
SHKBP1-214ENST00000597396 AZI2Q9H6S1 392 aa22.23■■□□□ 1.15
SHKBP1-214ENST00000597396 HAS3O00219 553 aa22.22■■□□□ 1.15
SHKBP1-214ENST00000597396 CCNE2O96020 404 aa22.22■■□□□ 1.15
SHKBP1-214ENST00000597396 SYN1P17600 705 aa22.22■■□□□ 1.15
SHKBP1-214ENST00000597396 U2AF2P26368 475 aaKnown RBP eCLIP22.22■■□□□ 1.15
SHKBP1-214ENST00000597396 MIS18BP1Q6P0N0 1132 aa22.22■■□□□ 1.15
SHKBP1-214ENST00000597396 POTEDQ86YR6 584 aa22.22■■□□□ 1.15
SHKBP1-214ENST00000597396 ETNPPLQ8TBG4 499 aa22.22■■□□□ 1.15
SHKBP1-214ENST00000597396 GJA10Q969M2 543 aa22.22■■□□□ 1.15
SHKBP1-214ENST00000597396 SMARCAD1Q9H4L7 1026 aa22.22■■□□□ 1.15
SHKBP1-214ENST00000597396 PDLIM7Q9NR12 457 aa22.22■■□□□ 1.15
SHKBP1-214ENST00000597396 SAMM50Q9Y512 469 aa22.22■■□□□ 1.15
SHKBP1-214ENST00000597396 VPS37CA5D8V6 355 aaPredicted RBP22.21■■□□□ 1.15
SHKBP1-214ENST00000597396 BACH1O14867 736 aa22.21■■□□□ 1.15
SHKBP1-214ENST00000597396 BAG4O95429 457 aaKnown RBP22.21■■□□□ 1.15
SHKBP1-214ENST00000597396 FAAP100Q0VG06 881 aa22.21■■□□□ 1.15
SHKBP1-214ENST00000597396 SMAP1Q8IYB5 467 aaPredicted RBP22.21■■□□□ 1.15
SHKBP1-214ENST00000597396 FAM20AQ96MK3 541 aa22.21■■□□□ 1.15
SHKBP1-214ENST00000597396 KCNMB3Q9NPA1 279 aa22.21■■□□□ 1.15
SHKBP1-214ENST00000597396 TMEM39AQ9NV64 488 aa22.21■■□□□ 1.15
SHKBP1-214ENST00000597396 HDAC6Q9UBN7 1215 aa22.21■■□□□ 1.15
SHKBP1-214ENST00000597396 LTBP2Q14767 1821 aa22.21■■□□□ 1.15
SHKBP1-214ENST00000597396 EMSYQ7Z589 1322 aa22.21■■□□□ 1.15
SHKBP1-214ENST00000597396 TBX3O15119 743 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 CHMP2AO43633 222 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 B4GALT4O60513 344 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 NEMFO60524 1076 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 LGR5O75473 907 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 PSMD10O75832 226 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 ATG7O95352 703 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 SUPT20HL2P0C7V6 817 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 FAM160B1Q5W0V3 765 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 TRPV6Q9H1D0 765 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 ERAP1Q9NZ08 941 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 NOD1Q9Y239 953 aa22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 RANBP2P49792 3224 aaKnown RBP22.2■■□□□ 1.14
SHKBP1-214ENST00000597396 WDR64B1ANS9 1081 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 WNT7AO00755 349 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 CD4P01730 458 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 PSAPP07602 524 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 MARK3P27448 753 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 MCM7P33993 719 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 TRAPPC10P48553 1259 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 STAT5BP51692 787 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 CALCRLQ16602 461 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 TTC38Q5R3I4 469 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 ABHD15Q6UXT9 468 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 SH3RF1Q7Z6J0 888 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 SESTD1Q86VW0 696 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 SLFN12Q8IYM2 578 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 PCYT2Q99447 389 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 UNC45AQ9H3U1 944 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 TRMT13Q9NUP7 481 aaKnown RBP22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 GTF2IRD1Q9UHL9 959 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 PCDHA10Q9Y5I2 948 aa22.19■■□□□ 1.14
SHKBP1-214ENST00000597396 A0A1W2PPC1 479 aa22.18■■□□□ 1.14
SHKBP1-214ENST00000597396 SMIM10L2AP0DMW4 78 aa22.18■■□□□ 1.14
SHKBP1-214ENST00000597396 SMIM10L2BP0DMW5 78 aa22.18■■□□□ 1.14
SHKBP1-214ENST00000597396 SFNP31947 248 aa22.18■■□□□ 1.14
SHKBP1-214ENST00000597396 JAK3P52333 1124 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms