RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 ZFHX2Q9C0A1 2572 aaPredicted RBP10.14□□□□□ -0.79
SMAD4-215ENST00000592911 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-215ENST00000592911 TMEM221A6NGB7 291 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 H3BRB1 525 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 M0R296 226 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 CTNNB1P35222 781 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 MFAP1P55081 439 aaKnown RBP10.13□□□□□ -0.79
SMAD4-215ENST00000592911 CHMP4BP1P59074 171 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 HNRNPUQ00839 825 aaKnown RBP eCLIP10.13□□□□□ -0.79
SMAD4-215ENST00000592911 SIGLEC14Q08ET2 396 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 ADAM15Q13444 863 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 FAM117BQ6P1L5 589 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 MFSD6Q6ZSS7 791 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 RASGRP2Q7LDG7 609 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 IQCA1Q86XH1 822 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 SMRP1Q8NCR6 262 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 ESR2Q92731 530 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 WNT8BQ93098 351 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 PBXIP1Q96AQ6 731 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 MSLNLQ96KJ4 702 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 SPATA33Q96N06 139 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 TAAR1Q96RJ0 339 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 PDCD2LQ9BRP1 358 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 TUT1Q9H6E5 874 aaKnown RBP10.13□□□□□ -0.79
SMAD4-215ENST00000592911 MUTYHQ9UIF7 546 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 ZNF215Q9UL58 517 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-215ENST00000592911 SQORQ9Y6N5 450 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 GVINP1Q7Z2Y8 2422 aa10.13□□□□□ -0.79
SMAD4-215ENST00000592911 CACNA1AO00555 2505 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 FGAP02671 866 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 LINC00271P0C7V0 271 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 ZNF286BP0CG31 522 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 ZXDAP98168 799 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 UBE3AQ05086 875 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 HYAL1Q12794 435 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 NEDD9Q14511 834 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 GNPTABQ3T906 1256 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 USH1GQ495M9 461 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 MCMDC2Q4G0Z9 681 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 CHST3Q7LGC8 479 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 ERMP1Q7Z2K6 904 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 VSIG10LQ86VR7 867 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 CMTR2Q8IYT2 770 aaKnown RBP10.12□□□□□ -0.79
SMAD4-215ENST00000592911 EFHBQ8N7U6 833 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 PRSS33Q8NF86 280 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 ZNF689Q96CS4 500 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-215ENST00000592911 CDCA3Q99618 268 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-215ENST00000592911 AMNQ9BXJ7 453 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 FTHL17Q9BXU8 183 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 BCL11AQ9H165 835 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 TOMM22Q9NS69 142 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 MTMR7Q9Y216 660 aa10.12□□□□□ -0.79
SMAD4-215ENST00000592911 MYO10Q9HD67 2058 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 NRCAMQ92823 1304 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 TBX10O75333 385 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 GGPS1O95749 300 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 SMIM10L2AP0DMW4 78 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 SMIM10L2BP0DMW5 78 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 MX1P20591 662 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 CCND2P30279 289 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 ICAM3P32942 547 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 ADAM17P78536 824 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 TCF15Q12870 199 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 CAMK2BQ13554 666 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 HSDL1Q3SXM5 330 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 PDE12Q6L8Q7 609 aaKnown RBP10.11□□□□□ -0.79
SMAD4-215ENST00000592911 METTL7BQ6UX53 244 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 EP400NLQ6ZTU2 488 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 RSPH3Q86UC2 560 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 ADGRF4Q8IZF3 695 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 GIMAP8Q8ND71 665 aaPredicted RBP10.11□□□□□ -0.79
SMAD4-215ENST00000592911 PNMA1Q8ND90 353 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 SENP7Q9BQF6 1050 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 PHF7Q9BWX1 381 aaPredicted RBP10.11□□□□□ -0.79
SMAD4-215ENST00000592911 EHMT1Q9H9B1 1298 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 COL20A1Q9P218 1284 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 KIAA1671Q9BY89 1806 aa10.11□□□□□ -0.79
SMAD4-215ENST00000592911 PLXNA3P51805 1871 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 FRMPD4Q14CM0 1322 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 NOP56O00567 594 aaKnown RBP10.1□□□□□ -0.79
SMAD4-215ENST00000592911 GFRA3O60609 400 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 RGS20O76081 388 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 LGALS2P05162 132 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 PARP1P09874 1014 aaKnown RBP10.1□□□□□ -0.79
SMAD4-215ENST00000592911 SRGAP2BP0DMP2 458 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 EIF2AK2P19525 551 aaKnown RBP10.1□□□□□ -0.79
SMAD4-215ENST00000592911 UBA1P22314 1058 aaKnown RBP10.1□□□□□ -0.79
SMAD4-215ENST00000592911 NDUFV1P49821 464 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 E2F4Q16254 413 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 QRICH1Q2TAL8 776 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
SMAD4-215ENST00000592911 XRRA1Q6P2D8 792 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 PPP1R13LQ8WUF5 828 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 MTMR8Q96EF0 704 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 RNPEPQ9H4A4 650 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 KAT14Q9H8E8 782 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 MLXIPQ9HAP2 919 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 PLAGL2Q9UPG8 496 aa10.1□□□□□ -0.79
SMAD4-215ENST00000592911 SALL3Q9BXA9 1300 aa10.09□□□□□ -0.79
SMAD4-215ENST00000592911 LOXHD1Q8IVV2 1947 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms