RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-228ENST00000592621 HAS1Q92839 578 aa13.23□□□□□ -0.29
RANBP3-228ENST00000592621 GJA10Q969M2 543 aa13.23□□□□□ -0.29
RANBP3-228ENST00000592621 VTI1AQ96AJ9 217 aa13.23□□□□□ -0.29
RANBP3-228ENST00000592621 ATP11BQ9Y2G3 1177 aa13.23□□□□□ -0.29
RANBP3-228ENST00000592621 MROH7Q68CQ1 1323 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 H3BRB1 525 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 DDX39AO00148 427 aaKnown RBP13.22□□□□□ -0.29
RANBP3-228ENST00000592621 TBX3O15119 743 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 SYT1P21579 422 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 HOXC8P31273 242 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 TOB1P50616 345 aaPredicted RBP13.22□□□□□ -0.29
RANBP3-228ENST00000592621 PTPN11Q06124 597 aaPredicted RBP13.22□□□□□ -0.29
RANBP3-228ENST00000592621 FAAP100Q0VG06 881 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 MFSD10Q14728 455 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 KIAA0753Q2KHM9 967 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 ZNF746Q6NUN9 644 aaPredicted RBP13.22□□□□□ -0.29
RANBP3-228ENST00000592621 C7orf61Q8IZ16 206 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 PPP1R13LQ8WUF5 828 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 FAM20AQ96MK3 541 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 CTAGE1Q96RT6 745 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 KATNAL1Q9BW62 490 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 TUT1Q9H6E5 874 aaKnown RBP13.22□□□□□ -0.29
RANBP3-228ENST00000592621 PDLIM7Q9NR12 457 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
RANBP3-228ENST00000592621 H3BQV1 296 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 B4GALT4O60513 344 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 PQBP1O60828 265 aaKnown RBP13.21□□□□□ -0.29
RANBP3-228ENST00000592621 TRAPPC10P48553 1259 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 KRT76Q01546 638 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 HIC1Q14526 733 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 UTP14CQ5TAP6 766 aaKnown RBP13.21□□□□□ -0.29
RANBP3-228ENST00000592621 LRCH2Q5VUJ6 765 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 SMAP1Q8IYB5 467 aaPredicted RBP13.21□□□□□ -0.29
RANBP3-228ENST00000592621 AFAP1L1Q8TED9 768 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 MTMR9Q96QG7 549 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 TEKT3Q9BXF9 490 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 UNC45AQ9H3U1 944 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 GTF2IRD1Q9UHL9 959 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 VAV3Q9UKW4 847 aa13.21□□□□□ -0.29
RANBP3-228ENST00000592621 TRIM43BA6NCK2 446 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 NEMFO60524 1076 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 GAS7O60861 476 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 CLTBP09497 229 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 SUPT20HL2P0C7V6 817 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 PDCP20941 246 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 SPIRE1Q08AE8 756 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 ORC2Q13416 577 aaPredicted RBP13.2□□□□□ -0.3
RANBP3-228ENST00000592621 GNL2Q13823 731 aaKnown RBP13.2□□□□□ -0.3
RANBP3-228ENST00000592621 GDF6Q6KF10 455 aaPredicted RBP13.2□□□□□ -0.3
RANBP3-228ENST00000592621 PLPPR4Q7Z2D5 763 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 SH3RF1Q7Z6J0 888 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 CCDC60Q8IWA6 550 aaPredicted RBP13.2□□□□□ -0.3
RANBP3-228ENST00000592621 TRIM43Q96BQ3 446 aaPredicted RBP13.2□□□□□ -0.3
RANBP3-228ENST00000592621 TRPV6Q9H1D0 765 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 TMEM60Q9H2L4 133 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 RNPEPQ9H4A4 650 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 SMARCAD1Q9H4L7 1026 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 HDAC6Q9UBN7 1215 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 TBX21Q9UL17 535 aa13.2□□□□□ -0.3
RANBP3-228ENST00000592621 ZNF215Q9UL58 517 aaPredicted RBP13.2□□□□□ -0.3
RANBP3-228ENST00000592621 LTBP2Q14767 1821 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 DCDC2CA8MYV0 355 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 WDR64B1ANS9 1081 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 KIAA0355O15063 1070 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 ATP4AP20648 1035 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 ADAM17P78536 824 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 PPP2R5CQ13362 524 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 NBR1Q14596 966 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 TTC38Q5R3I4 469 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 C4orf32Q8N8J7 132 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 RDM1Q8NG50 284 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 TRMT13Q9NUP7 481 aaKnown RBP13.19□□□□□ -0.3
RANBP3-228ENST00000592621 ERAP1Q9NZ08 941 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 PCDH10Q9P2E7 1040 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 MTMR6Q9Y217 621 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 PCDHA10Q9Y5I2 948 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 MAFBQ9Y5Q3 323 aaPredicted RBP13.19□□□□□ -0.3
RANBP3-228ENST00000592621 NR2E3Q9Y5X4 410 aa13.19□□□□□ -0.3
RANBP3-228ENST00000592621 IGSF9BQ9UPX0 1349 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 VPS37CA5D8V6 355 aaPredicted RBP13.18□□□□□ -0.3
RANBP3-228ENST00000592621 H0YGN5 161 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 EML1O00423 815 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 TLR3O15455 904 aaKnown RBP13.18□□□□□ -0.3
RANBP3-228ENST00000592621 SMIM10L2AP0DMW4 78 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 SMIM10L2BP0DMW5 78 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 SYN1P17600 705 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 ATP2B1P20020 1258 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 ITGB8P26012 769 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 SFNP31947 248 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 MCM7P33993 719 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 SLC26A2P50443 739 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 STAT5BP51692 787 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 JAK3P52333 1124 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 RESTQ13127 1097 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 PLCB4Q15147 1175 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 ZNF174Q15697 407 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 CALCRLQ16602 461 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 FAM47CQ5HY64 1035 aa13.18□□□□□ -0.3
RANBP3-228ENST00000592621 SWSAP1Q6NVH7 229 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms