RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 DPY19L2P1Q6NXN4 242 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 ADGRF4Q8IZF3 695 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 ANKRD13CQ8N6S4 541 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 ACTRT1Q8TDG2 376 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 SCFD1Q8WVM8 642 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 TBC1D5Q92609 795 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 MS4A14Q96JA4 679 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 SMARCAL1Q9NZC9 954 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 EHD2Q9NZN4 543 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 GGA2Q9UJY4 613 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 GGA1Q9UJY5 639 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 NENFQ9UMX5 172 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 TRAF3IP3Q9Y228 551 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 FRMPD2Q68DX3 1309 aaPredicted RBP13.6□□□□□ -0.23
PDE4A-207ENST00000590407 QSER1Q2KHR3 1735 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 MYH7BA7E2Y1 1941 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 TAF1LQ8IZX4 1826 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 A0A087X0T9 212 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 HMGB1P1B2RPK0 211 aaPredicted RBP13.6□□□□□ -0.23
PDE4A-207ENST00000590407 ZBTB5O15062 677 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 PPP1R11O60927 126 aaPredicted RBP13.6□□□□□ -0.23
PDE4A-207ENST00000590407 GFPT2O94808 682 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 UFL1O94874 794 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 FAM228BP0C875 321 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 CYP11B2P19099 503 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 CCT5P48643 541 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 ATP2B2Q01814 1243 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 CUL1Q13616 776 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 KIAA0753Q2KHM9 967 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 PACS2Q86VP3 889 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 SLFN12Q8IYM2 578 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 KCTD17Q8N5Z5 321 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 CNBD1Q8NA66 436 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 PIK3R5Q8WYR1 880 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 ZBTB9Q96C00 473 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 PSMB7Q99436 277 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 ISCUQ9H1K1 167 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 EPB41L5Q9HCM4 733 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 EMILIN3Q9NT22 766 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 INTUQ9ULD6 942 aa13.6□□□□□ -0.23
PDE4A-207ENST00000590407 A0A0A6YYK5 440 aaPredicted RBP13.59□□□□□ -0.23
PDE4A-207ENST00000590407 ZNF233A6NK53 670 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 TBX3O15119 743 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 NAP1L1P55209 391 aaKnown RBP13.59□□□□□ -0.23
PDE4A-207ENST00000590407 GUCY2DQ02846 1103 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 MFSD14BQ5SR56 506 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 GPBP1Q86WP2 473 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 SUGP1Q8IWZ8 645 aaKnown RBP13.59□□□□□ -0.23
PDE4A-207ENST00000590407 CCDC24Q8N4L8 307 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 SCFD2Q8WU76 684 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 CASKIN2Q8WXE0 1202 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 CCDC43Q96MW1 224 aaKnown RBP13.59□□□□□ -0.23
PDE4A-207ENST00000590407 NFU1Q9UMS0 254 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 DAGLAQ9Y4D2 1042 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 FAM169AQ9Y6X4 670 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 LY75O60449 1722 aa13.59□□□□□ -0.23
PDE4A-207ENST00000590407 ARFGEF1Q9Y6D6 1849 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 BBOX1O75936 387 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 KIF4AO95239 1232 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 ZBTB48P10074 688 aaPredicted RBP13.58□□□□□ -0.23
PDE4A-207ENST00000590407 AKR1B1P15121 316 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 SLC12A3P55017 1021 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 KCNQ4P56696 695 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 KCNH2Q12809 1159 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 ADAM9Q13443 819 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 RAPGEF1Q13905 1077 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 RPS6KA1Q15418 735 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 BMT2Q1RMZ1 405 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 SMIM5Q71RC9 77 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 EPM2AIP1Q7L775 607 aaPredicted RBP13.58□□□□□ -0.23
PDE4A-207ENST00000590407 IRF2BP2Q7Z5L9 587 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 YTHDF3Q7Z739 585 aaKnown RBP13.58□□□□□ -0.23
PDE4A-207ENST00000590407 LRRC47Q8N1G4 583 aaKnown RBP13.58□□□□□ -0.23
PDE4A-207ENST00000590407 LRRC57Q8N9N7 239 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 TAF4BQ92750 862 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 TAF1DQ9H5J8 278 aaPredicted RBP13.58□□□□□ -0.23
PDE4A-207ENST00000590407 PSTPIP2Q9H939 334 aa13.58□□□□□ -0.23
PDE4A-207ENST00000590407 GTPBP10A4D1E9 387 aaKnown RBP13.58□□□□□ -0.24
PDE4A-207ENST00000590407 FTCDO95954 541 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 FAM153BP0C7A2 387 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 ADRA2BP18089 450 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 NPEPPSP55786 919 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 AP3B2Q13367 1082 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 VPS72Q15906 364 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 UBE2SQ16763 222 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 FAM153CQ494X1 144 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 HERC4Q5GLZ8 1057 aaPredicted RBP13.58□□□□□ -0.24
PDE4A-207ENST00000590407 SLFN11Q7Z7L1 901 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 C3orf20Q8ND61 904 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 CRYGNQ8WXF5 182 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 RPGRQ92834 1020 aaKnown RBP13.58□□□□□ -0.24
PDE4A-207ENST00000590407 ATP6V1G3Q96LB4 118 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 KRT12Q99456 494 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 FGFBP2Q9BYJ0 223 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 DHX36Q9H2U1 1008 aaKnown RBP13.58□□□□□ -0.24
PDE4A-207ENST00000590407 PLEKHA4Q9H4M7 779 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 METTL14Q9HCE5 456 aaKnown RBP13.58□□□□□ -0.24
PDE4A-207ENST00000590407 GPCPD1Q9NPB8 672 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 FAM153AQ9UHL3 310 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 CCNL1Q9UK58 526 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms