RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 MTMR2Q13614 643 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 GIT2Q14161 759 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 COG2Q14746 738 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 VWA3BQ502W6 1294 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 SH3D19Q5HYK7 790 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 B3GNT9Q6UX72 402 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 MTERF4Q7Z6M4 381 aaKnown RBP11.52□□□□□ -0.57
VPS25-203ENST00000589520 RDM1Q8NG50 284 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 WRNIP1Q96S55 665 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 TIPINQ9BVW5 301 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 JADE2Q9NQC1 790 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 ADARB2Q9NS39 739 aaKnown RBP11.52□□□□□ -0.57
VPS25-203ENST00000589520 ZNHIT6Q9NWK9 470 aaKnown RBP11.52□□□□□ -0.57
VPS25-203ENST00000589520 TRMT1Q9NXH9 659 aaKnown RBP11.52□□□□□ -0.57
VPS25-203ENST00000589520 FAM184BQ9ULE4 1060 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 PPP2R2CQ9Y2T4 447 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 PCDHA2Q9Y5H9 948 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 UBIAD1Q9Y5Z9 338 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 IPO5O00410 1097 aaKnown RBP11.51□□□□□ -0.57
VPS25-203ENST00000589520 VWA5AO00534 786 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 CETN3O15182 167 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 CALUO43852 315 aaPredicted RBP11.51□□□□□ -0.57
VPS25-203ENST00000589520 LYPLA2O95372 231 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 GYPCP04921 128 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 P4HBP07237 508 aaKnown RBP11.51□□□□□ -0.57
VPS25-203ENST00000589520 ALAS1P13196 640 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 RPL13P26373 211 aaKnown RBP11.51□□□□□ -0.57
VPS25-203ENST00000589520 KRT9P35527 623 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 CDK17Q00537 523 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 BMT2Q1RMZ1 405 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 RNF207Q6ZRF8 634 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 REXO1L1PQ8IX06 675 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 ZC3H3Q8IXZ2 948 aaKnown RBP11.51□□□□□ -0.57
VPS25-203ENST00000589520 CYP2W1Q8TAV3 490 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 SYTL5Q8TDW5 730 aaPredicted RBP11.51□□□□□ -0.57
VPS25-203ENST00000589520 GJA10Q969M2 543 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 TRERF1Q96PN7 1200 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 NUCKS1Q9H1E3 243 aaKnown RBP11.51□□□□□ -0.57
VPS25-203ENST00000589520 RAVER2Q9HCJ3 691 aaKnown RBP11.51□□□□□ -0.57
VPS25-203ENST00000589520 OLFML3Q9NRN5 406 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 ABHD10Q9NUJ1 306 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 TCEAL9Q9UHQ7 104 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 ODF2LQ9ULJ1 636 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 TRAF3IP3Q9Y228 551 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 ZHX2Q9Y6X8 837 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 UBE4BO95155 1302 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 PHLPP2Q6ZVD8 1323 aa11.51□□□□□ -0.57
VPS25-203ENST00000589520 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 USP27XA6NNY8 438 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 TRAF5O00463 557 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 PDXKO00764 312 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 EIF3DO15371 548 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS25-203ENST00000589520 PPP1R12BO60237 982 aaPredicted RBP11.5□□□□□ -0.57
VPS25-203ENST00000589520 DKC1O60832 514 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS25-203ENST00000589520 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 MAPTP10636 758 aaKnown RBP11.5□□□□□ -0.57
VPS25-203ENST00000589520 SFNP31947 248 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 ZBED6P86452 979 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 PABPC4Q13310 644 aaKnown RBP eCLIP11.5□□□□□ -0.572e-9■■■□□ 16.9
VPS25-203ENST00000589520 TUBB2AQ13885 445 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 NFIL3Q16649 462 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 KNOP1Q1ED39 458 aaKnown RBP11.5□□□□□ -0.57
VPS25-203ENST00000589520 ZCWPW2Q504Y3 356 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 ARSHQ5FYA8 562 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 RINT1Q6NUQ1 792 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 POTEGQ6S5H5 508 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 POTEEQ6S8J3 1075 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 CATSPERGQ6ZRH7 1159 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 NLRX1Q86UT6 975 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 CCDC170Q8IYT3 715 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 CPXCR1Q8N123 301 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 SLC17A8Q8NDX2 589 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 CPLX3Q8WVH0 158 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 DCPSQ96C86 337 aaKnown RBP11.5□□□□□ -0.57
VPS25-203ENST00000589520 CDHR1Q96JP9 859 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 DNAJC7Q99615 494 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 TUBB2BQ9BVA1 445 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 BHMT2Q9H2M3 363 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 NDST4Q9H3R1 872 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 ZSWIM4Q9H7M6 989 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 METTL14Q9HCE5 456 aaKnown RBP11.5□□□□□ -0.57
VPS25-203ENST00000589520 KCNH7Q9NS40 1196 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 GGA3Q9NZ52 723 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.5□□□□□ -0.57
VPS25-203ENST00000589520 MYO1AQ9UBC5 1043 aa11.5□□□□□ -0.57
VPS25-203ENST00000589520 EML1O00423 815 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 PES1O00541 588 aaKnown RBP11.49□□□□□ -0.57
VPS25-203ENST00000589520 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
VPS25-203ENST00000589520 CTIFO43310 598 aaKnown RBP11.49□□□□□ -0.57
VPS25-203ENST00000589520 FAM13AO94988 1023 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 ARP10275 920 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 TRIM21P19474 475 aaKnown RBP11.49□□□□□ -0.57
VPS25-203ENST00000589520 GUCY2CP25092 1073 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 JAK3P52333 1124 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 RPS6P62753 249 aaKnown RBP11.49□□□□□ -0.57
VPS25-203ENST00000589520 KRT83P78385 493 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 ADAM9Q13443 819 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 ALCAMQ13740 583 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 MIIPQ5JXC2 388 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms