RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 FAM71BQ8TC56 605 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 TMEM40Q8WWA1 233 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 PPP2R3CQ969Q6 453 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 ZIC5Q96T25 663 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 TSC22D3Q99576 134 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 CAPS2Q9BXY5 557 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 GRIP2Q9C0E4 1043 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 RABEP2Q9H5N1 569 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 COMMD8Q9NX08 183 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 ZFATQ9P243 1243 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 VPS18Q9P253 973 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 DNAI1Q9UI46 699 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 TTLL3Q9Y4R7 772 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 CAPN7Q9Y6W3 813 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 ATP10AO60312 1499 aa6.24□□□□□ -1.41
LINC01538-201ENST00000588074 EIF4G3O43432 1585 aaKnown RBP6.24□□□□□ -1.41
LINC01538-201ENST00000588074 A0A096LPE4 126 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 A0A1W2PPZ6 126 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 MEIS3P2A8K0S8 358 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 AGR2O95994 175 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 ASGR2P07307 311 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 JMJD7P0C870 316 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 BCRP11274 1271 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 ALOX15P16050 662 aaPredicted RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 SH3BGRP55822 239 aaPredicted RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 PPP2R2AP63151 447 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 LSM11P83369 360 aaKnown RBP eCLIP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 IFFO1Q0D2I5 559 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 PCBP2Q15366 365 aaKnown RBP eCLIP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 SNCBQ16143 134 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 USH1GQ495M9 461 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 NAA16Q6N069 864 aaPredicted RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 GPR161Q8N6U8 529 aaKnown RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 ZBTB8BQ8NAP8 495 aaPredicted RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 PI4K2BQ8TCG2 481 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 SMARCC1Q92922 1105 aaPredicted RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 ITPKCQ96DU7 683 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 SCLYQ96I15 445 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 SLC9A7Q96T83 725 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 NAP1L3Q99457 506 aaPredicted RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 TCHPQ9BT92 498 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 SLC7A5P2Q9GIP4 190 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 IFT122Q9HBG6 1241 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 ZDHHC3Q9NYG2 299 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 GTF2A1LQ9UNN4 478 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 SPO11Q9Y5K1 396 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 FRMPD2Q68DX3 1309 aaPredicted RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 SNAPC4Q5SXM2 1469 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 GOLGA6L4A6NEF3 574 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 B4DLN1 442 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 H3BQF6 201 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 NFKBIEO00221 500 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 PARP1P09874 1014 aaKnown RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 TSPY4P0CV99 314 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 TSPY10P0CW01 314 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 PTGS1P23219 599 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 AMPHP49418 695 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 RENBPP51606 427 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 ZNF280AP59817 542 aaPredicted RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 GRB10Q13322 594 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 GBX1Q14549 363 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 SMUG1Q53HV7 270 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 ZC3H12BQ5HYM0 836 aaKnown RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 CCDC183Q5T5S1 534 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 VPS53Q5VIR6 699 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 THOC7Q6I9Y2 204 aaKnown RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 ZSCAN25Q6NSZ9 544 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 ADAMTSL4Q6UY14 1074 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 YTHDF3Q7Z739 585 aaKnown RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 HOOK3Q86VS8 718 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 ASAP3Q8TDY4 903 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 CTNNBL1Q8WYA6 563 aaPredicted RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 GJA10Q969M2 543 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 MARVELD3Q96A59 401 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 CLIP3Q96DZ5 547 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 MAML3Q96JK9 1138 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 TTC1Q99614 292 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 MRPL4Q9BYD3 311 aaKnown RBP6.23□□□□□ -1.41
LINC01538-201ENST00000588074 CCDC68Q9H2F9 335 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 VCX3BQ9H321 246 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 NDOR1Q9UHB4 597 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 TMCO1Q9UM00 188 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 SLC30A1Q9Y6M5 507 aa6.23□□□□□ -1.41
LINC01538-201ENST00000588074 PPIP5K1Q6PFW1 1433 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 FRMD3A2A2Y4 597 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 TBKBP1A7MCY6 615 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 PHF20L1A8MW92 1017 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 ANKRD65E5RJM6 399 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 hCG_1984214I3L0E3 225 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 RASSF9O75901 435 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 TROVE2P10155 538 aaKnown RBP eCLIP6.22□□□□□ -1.41
LINC01538-201ENST00000588074 POU3F2P20265 443 aaPredicted RBP6.22□□□□□ -1.41
LINC01538-201ENST00000588074 TCF7P36402 384 aaPredicted RBP6.22□□□□□ -1.41
LINC01538-201ENST00000588074 PDE3AQ14432 1141 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 NCAPHQ15003 741 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 ARHGEF6Q15052 776 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 SV2CQ496J9 727 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 MINDY4Q4G0A6 757 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 CCDC174Q6PII3 467 aa6.22□□□□□ -1.41
LINC01538-201ENST00000588074 Q6ZVU0 165 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms