RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 USP17L10C9JJH3 530 aa15.06■□□□□ 0
RNF43-205ENST00000581868 NOVP48745 357 aa15.06■□□□□ 0
RNF43-205ENST00000581868 KCTD19Q17RG1 926 aaPredicted RBP15.06■□□□□ 0
RNF43-205ENST00000581868 TADA2BQ86TJ2 420 aa15.06■□□□□ 0
RNF43-205ENST00000581868 SCFD1Q8WVM8 642 aa15.06■□□□□ 0
RNF43-205ENST00000581868 CEP63Q96MT8 703 aa15.06■□□□□ 0
RNF43-205ENST00000581868 GOLPH3Q9H4A6 298 aa15.06■□□□□ 0
RNF43-205ENST00000581868 PSTPIP2Q9H939 334 aa15.06■□□□□ 0
RNF43-205ENST00000581868 GGA1Q9UJY5 639 aa15.06■□□□□ 0
RNF43-205ENST00000581868 A0A087WUV0 522 aaPredicted RBP15.05■□□□□ 0
RNF43-205ENST00000581868 USP17L15C9J2P7 530 aa15.05■□□□□ 0
RNF43-205ENST00000581868 USP17L13C9JLJ4 530 aa15.05■□□□□ 0
RNF43-205ENST00000581868 USP17L11C9JVI0 530 aa15.05■□□□□ 0
RNF43-205ENST00000581868 USP17L18D6R9N7 530 aa15.05■□□□□ 0
RNF43-205ENST00000581868 USP17L22D6RA61 530 aa15.05■□□□□ 0
RNF43-205ENST00000581868 USP17L17D6RBQ6 530 aa15.05■□□□□ 0
RNF43-205ENST00000581868 USP17L19D6RCP7 530 aa15.05■□□□□ 0
RNF43-205ENST00000581868 USP17L20D6RJB6 530 aa15.05■□□□□ 0
RNF43-205ENST00000581868 STAT3P40763 770 aa15.05■□□□□ 0
RNF43-205ENST00000581868 MRPL12P52815 198 aaKnown RBP15.05■□□□□ 0
RNF43-205ENST00000581868 ZNF543Q08ER8 600 aa15.05■□□□□ 0
RNF43-205ENST00000581868 USP17L24Q0WX57 530 aa15.05■□□□□ 0
RNF43-205ENST00000581868 KCNH2Q12809 1159 aa15.05■□□□□ 0
RNF43-205ENST00000581868 USP17L6PQ6QN14 398 aa15.05■□□□□ 0
RNF43-205ENST00000581868 PROCA1Q8NCQ7 364 aaPredicted RBP15.05■□□□□ 0
RNF43-205ENST00000581868 TNRC6CQ9HCJ0 1690 aaKnown RBP15.05■□□□□ -0
RNF43-205ENST00000581868 GRID2IPA4D2P6 1211 aa15.05■□□□□ -0
RNF43-205ENST00000581868 MPHOSPH10O00566 681 aaKnown RBP15.05■□□□□ -0
RNF43-205ENST00000581868 KCNK3O14649 394 aa15.05■□□□□ -0
RNF43-205ENST00000581868 GNA14O95837 355 aa15.05■□□□□ -0
RNF43-205ENST00000581868 PPARDQ03181 441 aa15.05■□□□□ -0
RNF43-205ENST00000581868 SEPT2Q15019 361 aa15.05■□□□□ -0
RNF43-205ENST00000581868 IQCKQ8N0W5 287 aa15.05■□□□□ -0
RNF43-205ENST00000581868 TAF4BQ92750 862 aa15.05■□□□□ -0
RNF43-205ENST00000581868 NT5C3AQ9H0P0 336 aa15.05■□□□□ -0
RNF43-205ENST00000581868 EFCC1Q9HA90 598 aa15.05■□□□□ -0
RNF43-205ENST00000581868 PCDHA2Q9Y5H9 948 aa15.05■□□□□ -0
RNF43-205ENST00000581868 SBF2Q86WG5 1849 aa15.04■□□□□ -0
RNF43-205ENST00000581868 NDUFAB1O14561 156 aa15.04■□□□□ -0
RNF43-205ENST00000581868 RAD51CO43502 376 aa15.04■□□□□ -0
RNF43-205ENST00000581868 SLURP2P0DP57 97 aa15.04■□□□□ -0
RNF43-205ENST00000581868 SLF2Q8IX21 1173 aa15.04■□□□□ -0
RNF43-205ENST00000581868 DAGLAQ9Y4D2 1042 aa15.04■□□□□ -0
RNF43-205ENST00000581868 PCDHGC5Q9Y5F6 944 aa15.04■□□□□ -0
RNF43-205ENST00000581868 C6orf229H3BNL8 230 aa15.04■□□□□ -0
RNF43-205ENST00000581868 TTLL1O95922 423 aa15.04■□□□□ -0
RNF43-205ENST00000581868 SNHG28P0DPA3 235 aa15.04■□□□□ -0
RNF43-205ENST00000581868 IL1R1P14778 569 aa15.04■□□□□ -0
RNF43-205ENST00000581868 SLC9A1P19634 815 aa15.04■□□□□ -0
RNF43-205ENST00000581868 NR2F2P24468 414 aa15.04■□□□□ -0
RNF43-205ENST00000581868 CLK2P49760 499 aaKnown RBP15.04■□□□□ -0
RNF43-205ENST00000581868 GTF2IP78347 998 aa15.04■□□□□ -0
RNF43-205ENST00000581868 GUCY1A3Q02108 690 aa15.04■□□□□ -0
RNF43-205ENST00000581868 PTK2Q05397 1052 aa15.04■□□□□ -0
RNF43-205ENST00000581868 ARHGAP27Q6ZUM4 889 aa15.04■□□□□ -0
RNF43-205ENST00000581868 RNPC3Q96LT9 517 aaKnown RBP15.04■□□□□ -0
RNF43-205ENST00000581868 INPP4AQ96PE3 977 aaPredicted RBP15.04■□□□□ -0
RNF43-205ENST00000581868 FAM107BQ9H098 131 aa15.04■□□□□ -0
RNF43-205ENST00000581868 KCTD10Q9H3F6 313 aa15.04■□□□□ -0
RNF43-205ENST00000581868 CETN3O15182 167 aa15.03■□□□□ -0
RNF43-205ENST00000581868 CYP11B2P19099 503 aa15.03■□□□□ -0
RNF43-205ENST00000581868 SKOR1P84550 965 aa15.03■□□□□ -0
RNF43-205ENST00000581868 HLTFQ14527 1009 aaKnown RBP eCLIP15.03■□□□□ -0
RNF43-205ENST00000581868 RPS6KA1Q15418 735 aa15.03■□□□□ -0
RNF43-205ENST00000581868 CDC37Q16543 378 aaPredicted RBP15.03■□□□□ -0
RNF43-205ENST00000581868 TRAPPC3LQ5T215 181 aa15.03■□□□□ -0
RNF43-205ENST00000581868 FOXR2Q6PJQ5 311 aa15.03■□□□□ -0
RNF43-205ENST00000581868 MAATS1Q7Z4T9 603 aa15.03■□□□□ -0
RNF43-205ENST00000581868 USP38Q8NB14 1042 aa15.03■□□□□ -0
RNF43-205ENST00000581868 PIK3R5Q8WYR1 880 aa15.03■□□□□ -0
RNF43-205ENST00000581868 SPAG5Q96R06 1193 aa15.03■□□□□ -0
RNF43-205ENST00000581868 GANQ9H2C0 597 aa15.03■□□□□ -0
RNF43-205ENST00000581868 CENPHQ9H3R5 247 aa15.03■□□□□ -0
RNF43-205ENST00000581868 AIPL1Q9NZN9 384 aa15.03■□□□□ -0
RNF43-205ENST00000581868 KDM3AQ9Y4C1 1321 aa15.03■□□□□ -0
RNF43-205ENST00000581868 POTEFA5A3E0 1075 aa15.03■□□□□ -0
RNF43-205ENST00000581868 POTEIP0CG38 1075 aa15.03■□□□□ -0
RNF43-205ENST00000581868 ATP2B4P23634 1241 aa15.03■□□□□ -0
RNF43-205ENST00000581868 CASP5P51878 434 aa15.03■□□□□ -0
RNF43-205ENST00000581868 POTEGQ6S5H5 508 aa15.03■□□□□ -0
RNF43-205ENST00000581868 POTEEQ6S8J3 1075 aa15.03■□□□□ -0
RNF43-205ENST00000581868 C15orf52Q6ZUT6 534 aaKnown RBP15.03■□□□□ -0
RNF43-205ENST00000581868 FAM163AQ96GL9 167 aaPredicted RBP15.03■□□□□ -0
RNF43-205ENST00000581868 DDX4Q9NQI0 724 aaKnown RBP15.03■□□□□ -0
RNF43-205ENST00000581868 POLLQ9UGP5 575 aa15.03■□□□□ -0
RNF43-205ENST00000581868 HDAC9Q9UKV0 1011 aa15.03■□□□□ -0
RNF43-205ENST00000581868 MEIS1O00470 390 aa15.02■□□□□ -0
RNF43-205ENST00000581868 ZBTB5O15062 677 aa15.02■□□□□ -0
RNF43-205ENST00000581868 CEP104O60308 925 aa15.02■□□□□ -0
RNF43-205ENST00000581868 MED24O75448 989 aa15.02■□□□□ -0
RNF43-205ENST00000581868 ERLIN2O94905 339 aa15.02■□□□□ -0
RNF43-205ENST00000581868 HOXA7P31268 230 aaPredicted RBP15.02■□□□□ -0
RNF43-205ENST00000581868 TNNC1P63316 161 aa15.02■□□□□ -0
RNF43-205ENST00000581868 ARSHQ5FYA8 562 aa15.02■□□□□ -0
RNF43-205ENST00000581868 ZNF571Q7Z3V5 609 aaPredicted RBP15.02■□□□□ -0
RNF43-205ENST00000581868 GAKO14976 1311 aa15.02■□□□□ -0
RNF43-205ENST00000581868 NRAPQ86VF7 1730 aa15.02■□□□□ -0
RNF43-205ENST00000581868 RIMBP2O15034 1052 aa15.02□□□□□ -0.01
RNF43-205ENST00000581868 GABPAQ06546 454 aa15.02□□□□□ -0.01
RNF43-205ENST00000581868 PRR5LQ6MZQ0 368 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms