RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 GALNT17Q6IS24 598 aa15.08■□□□□ 0
NUP85-215ENST00000580879 TMEM199Q8N511 208 aa15.08■□□□□ 0
NUP85-215ENST00000580879 WASF1Q92558 559 aa15.08■□□□□ 0
NUP85-215ENST00000580879 SCLYQ96I15 445 aa15.08■□□□□ 0
NUP85-215ENST00000580879 TBC1D32Q96NH3 1257 aa15.08■□□□□ 0
NUP85-215ENST00000580879 IPO5O00410 1097 aaKnown RBP15.07■□□□□ 0
NUP85-215ENST00000580879 SMIM10L2AP0DMW4 78 aa15.07■□□□□ 0
NUP85-215ENST00000580879 SMIM10L2BP0DMW5 78 aa15.07■□□□□ 0
NUP85-215ENST00000580879 CIITAP33076 1130 aa15.07■□□□□ 0
NUP85-215ENST00000580879 ACTR2P61160 394 aa15.07■□□□□ 0
NUP85-215ENST00000580879 INF2Q27J81 1249 aa15.07■□□□□ 0
NUP85-215ENST00000580879 FAM177A1Q8N128 213 aaPredicted RBP15.07■□□□□ 0
NUP85-215ENST00000580879 DHX38Q92620 1227 aaKnown RBP15.07■□□□□ 0
NUP85-215ENST00000580879 GLG1Q92896 1179 aa15.07■□□□□ 0
NUP85-215ENST00000580879 ZSCAN31Q96LW9 406 aaPredicted RBP15.07■□□□□ 0
NUP85-215ENST00000580879 ZNF577Q9BSK1 485 aa15.07■□□□□ 0
NUP85-215ENST00000580879 ZNF215Q9UL58 517 aaPredicted RBP15.07■□□□□ 0
NUP85-215ENST00000580879 NFASCO94856 1347 aa15.07■□□□□ 0
NUP85-215ENST00000580879 LAMA2P24043 3122 aaKnown RBP15.07■□□□□ 0
NUP85-215ENST00000580879 DHX15O43143 795 aaKnown RBP15.06■□□□□ 0
NUP85-215ENST00000580879 CD2BP2O95400 341 aaKnown RBP15.06■□□□□ 0
NUP85-215ENST00000580879 TDP2O95551 362 aa15.06■□□□□ 0
NUP85-215ENST00000580879 CCNE2O96020 404 aa15.06■□□□□ 0
NUP85-215ENST00000580879 SETQ01105 290 aaPredicted RBP15.06■□□□□ 0
NUP85-215ENST00000580879 NR5A1Q13285 461 aa15.06■□□□□ 0
NUP85-215ENST00000580879 PPIGQ13427 754 aaKnown RBP eCLIP15.06■□□□□ 03e-8■■■□□ 17
NUP85-215ENST00000580879 NONOQ15233 471 aaKnown RBP eCLIP15.06■□□□□ 0
NUP85-215ENST00000580879 C16orf59Q7L2K0 433 aa15.06■□□□□ 0
NUP85-215ENST00000580879 KRT25Q7Z3Z0 450 aa15.06■□□□□ 0
NUP85-215ENST00000580879 WNT8BQ93098 351 aa15.06■□□□□ 0
NUP85-215ENST00000580879 GJA10Q969M2 543 aa15.06■□□□□ 0
NUP85-215ENST00000580879 LENG9Q96B70 501 aa15.06■□□□□ 0
NUP85-215ENST00000580879 LRCH3Q96II8 777 aa15.06■□□□□ 0
NUP85-215ENST00000580879 PCYT2Q99447 389 aa15.06■□□□□ 0
NUP85-215ENST00000580879 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.06■□□□□ 07e-8■■□□□ 12.3
NUP85-215ENST00000580879 RNPEPQ9H4A4 650 aa15.06■□□□□ 0
NUP85-215ENST00000580879 SH2B1Q9NRF2 756 aaPredicted RBP15.06■□□□□ 0
NUP85-215ENST00000580879 SETD4Q9NVD3 440 aa15.06■□□□□ 0
NUP85-215ENST00000580879 CCDC194A0A1B0GVG4 234 aa15.05■□□□□ -0
NUP85-215ENST00000580879 C17orf102A2RUQ5 167 aa15.05■□□□□ -0
NUP85-215ENST00000580879 FAM205CA6NFA0 338 aa15.05■□□□□ -0
NUP85-215ENST00000580879 MSH4O15457 936 aa15.05■□□□□ -0
NUP85-215ENST00000580879 ST18O60284 1047 aa15.05■□□□□ -0
NUP85-215ENST00000580879 USP11P51784 963 aa15.05■□□□□ -0
NUP85-215ENST00000580879 GUCY1B3Q02153 619 aa15.05■□□□□ -0
NUP85-215ENST00000580879 EARS2Q5JPH6 523 aaKnown RBP15.05■□□□□ -0
NUP85-215ENST00000580879 KRT40Q6A162 431 aa15.05■□□□□ -0
NUP85-215ENST00000580879 PIK3AP1Q6ZUJ8 805 aa15.05■□□□□ -0
NUP85-215ENST00000580879 RETREG2Q8NC44 543 aa15.05■□□□□ -0
NUP85-215ENST00000580879 ATP6V0A1Q93050 837 aa15.05■□□□□ -0
NUP85-215ENST00000580879 BACH2Q9BYV9 841 aa15.05■□□□□ -0
NUP85-215ENST00000580879 SZT2Q5T011 3432 aa15.04■□□□□ -0
NUP85-215ENST00000580879 TREHO43280 583 aa15.04■□□□□ -0
NUP85-215ENST00000580879 KRT2P35908 639 aa15.04■□□□□ -0
NUP85-215ENST00000580879 BFSP2Q13515 415 aa15.04■□□□□ -0
NUP85-215ENST00000580879 TRIM29Q14134 588 aa15.04■□□□□ -0
NUP85-215ENST00000580879 LETM2Q2VYF4 491 aa15.04■□□□□ -0
NUP85-215ENST00000580879 TMEM240Q5SV17 173 aa15.04■□□□□ -0
NUP85-215ENST00000580879 ZNF365Q70YC5 407 aa15.04■□□□□ -0
NUP85-215ENST00000580879 DEFB128Q7Z7B8 93 aa15.04■□□□□ -0
NUP85-215ENST00000580879 RNPC3Q96LT9 517 aaKnown RBP15.04■□□□□ -0
NUP85-215ENST00000580879 LLPHQ9BRT6 129 aaKnown RBP15.04■□□□□ -0
NUP85-215ENST00000580879 SMARCAD1Q9H4L7 1026 aa15.04■□□□□ -0
NUP85-215ENST00000580879 AZI2Q9H6S1 392 aa15.04■□□□□ -0
NUP85-215ENST00000580879 IL23AQ9NPF7 189 aa15.04■□□□□ -0
NUP85-215ENST00000580879 ERAP1Q9NZ08 941 aa15.04■□□□□ -0
NUP85-215ENST00000580879 EMSYQ7Z589 1322 aa15.03■□□□□ -0
NUP85-215ENST00000580879 PITPNM1O00562 1244 aa15.03■□□□□ -0
NUP85-215ENST00000580879 BACH1O14867 736 aa15.03■□□□□ -0
NUP85-215ENST00000580879 LGR5O75473 907 aa15.03■□□□□ -0
NUP85-215ENST00000580879 MMP1P03956 469 aa15.03■□□□□ -0
NUP85-215ENST00000580879 IQCF3P0C7M6 154 aa15.03■□□□□ -0
NUP85-215ENST00000580879 HOXC8P31273 242 aa15.03■□□□□ -0
NUP85-215ENST00000580879 PPFIA1Q13136 1202 aa15.03■□□□□ -0
NUP85-215ENST00000580879 PTK7Q13308 1070 aa15.03■□□□□ -0
NUP85-215ENST00000580879 LRIT3Q3SXY7 679 aa15.03■□□□□ -0
NUP85-215ENST00000580879 ABHD15Q6UXT9 468 aa15.03■□□□□ -0
NUP85-215ENST00000580879 DIS3L2Q8IYB7 885 aaKnown RBP15.03■□□□□ -0
NUP85-215ENST00000580879 CCDC155Q8N6L0 562 aa15.03■□□□□ -0
NUP85-215ENST00000580879 LMBR1Q8WVP7 490 aa15.03■□□□□ -0
NUP85-215ENST00000580879 TNFRSF25Q93038 417 aa15.03■□□□□ -0
NUP85-215ENST00000580879 VWCEQ96DN2 955 aa15.03■□□□□ -0
NUP85-215ENST00000580879 BRMS1Q9HCU9 246 aa15.03■□□□□ -0
NUP85-215ENST00000580879 TBC1D22BQ9NU19 505 aa15.03■□□□□ -0
NUP85-215ENST00000580879 CYP3A7-CYP3A51PA0A087WV96 503 aa15.02■□□□□ -0
NUP85-215ENST00000580879 BTBD18B2RXH4 712 aa15.02■□□□□ -0
NUP85-215ENST00000580879 CHMP2AO43633 222 aa15.02■□□□□ -0
NUP85-215ENST00000580879 SLC37A4O43826 429 aa15.02■□□□□ -0
NUP85-215ENST00000580879 ATG7O95352 703 aa15.02■□□□□ -0
NUP85-215ENST00000580879 CKBP12277 381 aa15.02■□□□□ -0
NUP85-215ENST00000580879 CYP3A7P24462 503 aa15.02■□□□□ -0
NUP85-215ENST00000580879 STAT5BP51692 787 aa15.02■□□□□ -0
NUP85-215ENST00000580879 IGBP1P78318 339 aa15.02■□□□□ -0
NUP85-215ENST00000580879 PLCB4Q15147 1175 aa15.02■□□□□ -0
NUP85-215ENST00000580879 TRIM71Q2Q1W2 868 aaKnown RBP15.02■□□□□ -0
NUP85-215ENST00000580879 Q4G0T1 1027 aa15.02■□□□□ -0
NUP85-215ENST00000580879 SWSAP1Q6NVH7 229 aa15.02■□□□□ -0
NUP85-215ENST00000580879 PSRC1Q6PGN9 363 aaPredicted RBP15.02■□□□□ -0
NUP85-215ENST00000580879 NEK8Q86SG6 692 aa15.02■□□□□ -0
NUP85-215ENST00000580879 SERINC5Q86VE9 423 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms