RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 ZBTB43O43298 467 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 FOSP01100 380 aaPredicted RBP13.43□□□□□ -0.26
PRPF8-206ENST00000572723 AMHP03971 560 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 HMGB1P09429 215 aaKnown RBP13.43□□□□□ -0.26
PRPF8-206ENST00000572723 TCF7P36402 384 aaPredicted RBP13.43□□□□□ -0.26
PRPF8-206ENST00000572723 ERVK-21P61565 698 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 ARHGAP4P98171 946 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 SP4Q02446 784 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 GRB10Q13322 594 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
PRPF8-206ENST00000572723 MTMR1Q13613 665 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 UBE2SQ16763 222 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.43□□□□□ -0.26
PRPF8-206ENST00000572723 HEATR3Q7Z4Q2 680 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 RPAINQ86UA6 219 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 TRIM50Q86XT4 487 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 MICALL1Q8N3F8 863 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 IL27Q8NEV9 243 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 TGS1Q96RS0 853 aaKnown RBP13.43□□□□□ -0.26
PRPF8-206ENST00000572723 BRWD1Q9NSI6 2320 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 ERAP1Q9NZ08 941 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 COG5Q9UP83 839 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 TELO2Q9Y4R8 837 aa13.43□□□□□ -0.26
PRPF8-206ENST00000572723 V9GY48 417 aaPredicted RBP13.43□□□□□ -0.26
PRPF8-206ENST00000572723 LINC01553A4QN01 128 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 hCG_1984214I3L0E3 225 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 LPXNO60711 386 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 CDC45O75419 566 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 RCAN1P53805 252 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 FUT2Q10981 343 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 SKIV2LQ15477 1246 aaKnown RBP13.42□□□□□ -0.26
PRPF8-206ENST00000572723 RTN1Q16799 776 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 ZNF713Q8N859 430 aaPredicted RBP13.42□□□□□ -0.26
PRPF8-206ENST00000572723 LMBR1Q8WVP7 490 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 GLT8D2Q9H1C3 349 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 SMARCAD1Q9H4L7 1026 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 SUGCTQ9HAC7 445 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 RIC8AQ9NPQ8 531 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 BRPF3Q9ULD4 1205 aa13.42□□□□□ -0.26
PRPF8-206ENST00000572723 BMP1P13497 986 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 NAPAP54920 295 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 HTRA4P83105 476 aaPredicted RBP13.41□□□□□ -0.26
PRPF8-206ENST00000572723 ADCK5Q3MIX3 580 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 KRT40Q6A162 431 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 WWC2Q6AWC2 1192 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 PPP1R18Q6NYC8 613 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 FAM117BQ6P1L5 589 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 TAF2Q6P1X5 1199 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 RSPH3Q86UC2 560 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 SKAP1Q86WV1 359 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 MYOCDQ8IZQ8 938 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 ADAMTS19Q8TE59 1207 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 APBB2Q92870 758 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 GLG1Q92896 1179 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 TNPO1Q92973 898 aaKnown RBP13.41□□□□□ -0.26
PRPF8-206ENST00000572723 TOP1MTQ969P6 601 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 MXRA8Q9BRK3 442 aa13.41□□□□□ -0.26
PRPF8-206ENST00000572723 SPTBN5Q9NRC6 3674 aaKnown RBP13.41□□□□□ -0.26
PRPF8-206ENST00000572723 CCDC196A0A1B0GTZ2 297 aa13.4□□□□□ -0.26
PRPF8-206ENST00000572723 MBLAC1A4D2B0 266 aaPredicted RBP13.4□□□□□ -0.26
PRPF8-206ENST00000572723 SMCO2A6NFE2 343 aa13.4□□□□□ -0.26
PRPF8-206ENST00000572723 RRN3P2A6NIE6 340 aa13.4□□□□□ -0.26
PRPF8-206ENST00000572723 CTSHP09668 335 aa13.4□□□□□ -0.26
PRPF8-206ENST00000572723 PPFIA1Q13136 1202 aa13.4□□□□□ -0.26
PRPF8-206ENST00000572723 SPRED2Q7Z698 418 aa13.4□□□□□ -0.26
PRPF8-206ENST00000572723 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
PRPF8-206ENST00000572723 KCNB2Q92953 911 aa13.4□□□□□ -0.26
PRPF8-206ENST00000572723 HLA-CQ95604 372 aa13.4□□□□□ -0.26
PRPF8-206ENST00000572723 TCEANC2Q96MN5 208 aa13.4□□□□□ -0.26
PRPF8-206ENST00000572723 KCNH7Q9NS40 1196 aa13.4□□□□□ -0.26
PRPF8-206ENST00000572723 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
PRPF8-206ENST00000572723 BARHL2Q9NY43 387 aa13.4□□□□□ -0.26
PRPF8-206ENST00000572723 NFASCO94856 1347 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 CNTNAP5Q8WYK1 1306 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 BDP1A6H8Y1 2624 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 KLF18A0A0U1RQI7 1052 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 GOLGA8AA7E2F4 631 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 GOLGA8BA8MQT2 603 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 MEIS1O00470 390 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 CHRNA1P02708 482 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 RPLP2P05387 115 aaKnown RBP13.39□□□□□ -0.27
PRPF8-206ENST00000572723 ADCY7P51828 1080 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 FGD1P98174 961 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 TFF2Q03403 129 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 GRIK4Q16099 956 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 CEP55Q53EZ4 464 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 TYW1BQ6NUM6 668 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 CYP2W1Q8TAV3 490 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 SAMD11Q96NU1 681 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 UHRF1Q96T88 793 aaPredicted RBP13.39□□□□□ -0.27
PRPF8-206ENST00000572723 SDF4Q9BRK5 362 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 IFIH1Q9BYX4 1025 aaKnown RBP13.39□□□□□ -0.27
PRPF8-206ENST00000572723 OSBPL7Q9BZF2 842 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 JPH1Q9HDC5 661 aaPredicted RBP13.39□□□□□ -0.27
PRPF8-206ENST00000572723 PKD2L1Q9P0L9 805 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 SLC9A2Q9UBY0 812 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 MYO7AQ13402 2215 aa13.39□□□□□ -0.27
PRPF8-206ENST00000572723 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms