RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 SF3B6Q9Y3B4 125 aaKnown RBP8.65□□□□□ -1.02
CNOT1-222ENST00000570139 THSD7AQ9UPZ6 1657 aa8.65□□□□□ -1.03
CNOT1-222ENST00000570139 CICQ96RK0 1608 aaPredicted RBP8.65□□□□□ -1.03
CNOT1-222ENST00000570139 BCL9LQ86UU0 1499 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 ABCC4O15439 1325 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 DOT1LQ8TEK3 1739 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 EXOC5O00471 708 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 NEMP1O14524 444 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 DEAF1O75398 565 aaPredicted RBP8.64□□□□□ -1.03
CNOT1-222ENST00000570139 NID1P14543 1247 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 ASPAP45381 313 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 EIF4A1P60842 406 aaKnown RBP8.64□□□□□ -1.03
CNOT1-222ENST00000570139 MVPQ14764 893 aaKnown RBP8.64□□□□□ -1.03
CNOT1-222ENST00000570139 BRD3Q15059 726 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 FAM102BQ5T8I3 360 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 TSPYL6Q8N831 410 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 TMEM145Q8NBT3 493 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 DNAJB8Q8NHS0 232 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 TTC8Q8TAM2 541 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 DCAF4Q8WV16 495 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 RNF141Q8WVD5 230 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 EDARADDQ8WWZ3 215 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 VWCEQ96DN2 955 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 FBXL18Q96ME1 805 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 GSX1Q9H4S2 264 aaPredicted RBP8.64□□□□□ -1.03
CNOT1-222ENST00000570139 CYP26B1Q9NR63 512 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 LRRC4BQ9NT99 713 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 ZNF180Q9UJW8 692 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 PCOLCE2Q9UKZ9 415 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 C5P01031 1676 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 ITGB4P16144 1822 aa8.64□□□□□ -1.03
CNOT1-222ENST00000570139 ZNF831Q5JPB2 1677 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 ERBB4Q15303 1308 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 BLACEA4D250 179 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 FBXO21O94952 628 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 CRTAMO95727 393 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 APBA3O96018 575 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 TRIM27P14373 513 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 AMPD2Q01433 879 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 NTRK3Q16288 839 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 SLC35F1Q5T1Q4 408 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 MEX3CQ5U5Q3 659 aaKnown RBP8.63□□□□□ -1.03
CNOT1-222ENST00000570139 PPP4R4Q6NUP7 873 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 LETMD1Q6P1Q0 360 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 ZNF790Q6PG37 636 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 USP53Q70EK8 1073 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 UBE3DQ7Z6J8 389 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 C14orf80Q86SX3 495 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 FIBCD1Q8N539 461 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 SAMD3Q8N6K7 520 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 BRF1Q92994 677 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 MENTQ9BUN1 341 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 CCDC8Q9H0W5 538 aaPredicted RBP8.63□□□□□ -1.03
CNOT1-222ENST00000570139 NOB1Q9ULX3 412 aaKnown RBP8.63□□□□□ -1.03
CNOT1-222ENST00000570139 GLI3P10071 1580 aa8.63□□□□□ -1.03
CNOT1-222ENST00000570139 DLL1O00548 723 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 RFPL1O75677 317 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 ITIH2P19823 946 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 HSPA1LP34931 641 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 ECI1P42126 302 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 RAC1P63000 192 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 FAPQ12884 760 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 PPP2R5DQ14738 602 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 DDB1Q16531 1140 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 GFOD2Q3B7J2 385 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 FDX2Q6P4F2 183 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 ACAD11Q709F0 780 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 NPAS3Q8IXF0 933 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 GALNT6Q8NCL4 622 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 EXOC6Q8TAG9 804 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 C1orf159Q96HA4 380 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 FMNL2Q96PY5 1086 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 ZFYVE21Q9BQ24 234 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 DBF4Q9UBU7 674 aaPredicted RBP8.62□□□□□ -1.03
CNOT1-222ENST00000570139 KCPQ6ZWJ8 1503 aa8.62□□□□□ -1.03
CNOT1-222ENST00000570139 IBTKQ9P2D0 1353 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-222ENST00000570139 ELL2O00472 640 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-222ENST00000570139 GABRDO14764 452 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 TIAF1O95411 115 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 OCRLQ01968 901 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 GUCY1A3Q02108 690 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 MLC1Q15049 377 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 SF1Q15637 639 aaKnown RBP8.61□□□□□ -1.03
CNOT1-222ENST00000570139 C20orf194Q5TEA3 1177 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 IQSEC1Q6DN90 963 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 MTDHQ86UE4 582 aaKnown RBP8.61□□□□□ -1.03
CNOT1-222ENST00000570139 FBXO11Q86XK2 927 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 C12orf50Q8NA57 414 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-222ENST00000570139 COG1Q8WTW3 980 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 BTBD6Q96KE9 485 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 MIPEPQ99797 713 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 DSCC1Q9BVC3 393 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 TEX13AQ9BXU3 409 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-222ENST00000570139 RTFDC1Q9BY42 306 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-222ENST00000570139 ZNF700Q9H0M5 742 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 LUC7LQ9NQ29 371 aaKnown RBP8.61□□□□□ -1.03
CNOT1-222ENST00000570139 TMOD3Q9NYL9 352 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 MIS18AQ9NYP9 233 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 SAMD15Q9P1V8 674 aa8.61□□□□□ -1.03
CNOT1-222ENST00000570139 USP21Q9UK80 565 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms