RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 CYP3A7-CYP3A51PA0A087WV96 503 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 TARSL2A2RTX5 802 aaKnown RBP19.63■□□□□ 0.73
CMTM3-214ENST00000567572 CYP3A7P24462 503 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 CYP2C19P33261 490 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 KIF5AQ12840 1032 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 TRAF1Q13077 416 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 SPA17Q15506 151 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 CHURC1Q8WUH1 139 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 RANBP17Q9H2T7 1088 aaKnown RBP19.63■□□□□ 0.73
CMTM3-214ENST00000567572 ST7Q9NRC1 585 aa19.63■□□□□ 0.73
CMTM3-214ENST00000567572 PIK3CDO00329 1044 aa19.62■□□□□ 0.73
CMTM3-214ENST00000567572 USO1O60763 962 aaKnown RBP19.62■□□□□ 0.73
CMTM3-214ENST00000567572 TAL1P17542 331 aaPredicted RBP19.62■□□□□ 0.73
CMTM3-214ENST00000567572 OAS2P29728 719 aaKnown RBP19.62■□□□□ 0.73
CMTM3-214ENST00000567572 ZYXQ15942 572 aaKnown RBP19.62■□□□□ 0.73
CMTM3-214ENST00000567572 LRRC55Q6ZSA7 311 aa19.62■□□□□ 0.73
CMTM3-214ENST00000567572 FAM160B2Q86V87 743 aa19.62■□□□□ 0.73
CMTM3-214ENST00000567572 CCDC42Q96M95 316 aa19.62■□□□□ 0.73
CMTM3-214ENST00000567572 PNKPQ96T60 521 aa19.62■□□□□ 0.73
CMTM3-214ENST00000567572 NUCKS1Q9H1E3 243 aaKnown RBP19.62■□□□□ 0.73
CMTM3-214ENST00000567572 DEFB129Q9H1M3 183 aa19.62■□□□□ 0.73
CMTM3-214ENST00000567572 BMP2KQ9NSY1 1161 aaPredicted RBP19.62■□□□□ 0.73
CMTM3-214ENST00000567572 GINM1Q9NU53 330 aa19.62■□□□□ 0.73
CMTM3-214ENST00000567572 L1RE1Q9UN81 338 aa19.62■□□□□ 0.73
CMTM3-214ENST00000567572 DICER1Q9UPY3 1922 aaKnown RBP19.62■□□□□ 0.73
CMTM3-214ENST00000567572 GNA14O95837 355 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 FOSP01100 380 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-214ENST00000567572 TRIM58Q8NG06 486 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 DDX12PQ92771 950 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 CEP63Q96MT8 703 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 ACBD3Q9H3P7 528 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 STK24Q9Y6E0 443 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 POTEMA6NI47 508 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 ARHGAP4P98171 946 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 MYOCDQ8IZQ8 938 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 RUBCNQ92622 972 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 ZNF341Q9BYN7 854 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 KCNMB3Q9NPA1 279 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 FEM1BQ9UK73 627 aa19.61■□□□□ 0.73
CMTM3-214ENST00000567572 CTNND1O60716 968 aaKnown RBP19.6■□□□□ 0.73
CMTM3-214ENST00000567572 SREBF1P36956 1147 aa19.6■□□□□ 0.73
CMTM3-214ENST00000567572 ITIH3Q06033 890 aa19.6■□□□□ 0.73
CMTM3-214ENST00000567572 MAP9Q49MG5 647 aa19.6■□□□□ 0.73
CMTM3-214ENST00000567572 ZCWPW2Q504Y3 356 aa19.6■□□□□ 0.73
CMTM3-214ENST00000567572 SECISBP2LQ93073 1101 aaKnown RBP19.6■□□□□ 0.73
CMTM3-214ENST00000567572 TRIM10Q9UDY6 481 aa19.6■□□□□ 0.73
CMTM3-214ENST00000567572 PRLRP16471 622 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 MARSP56192 900 aaKnown RBP19.59■□□□□ 0.73
CMTM3-214ENST00000567572 FKBP3Q00688 224 aaKnown RBP19.59■□□□□ 0.73
CMTM3-214ENST00000567572 SYN2Q92777 582 aaPredicted RBP19.59■□□□□ 0.73
CMTM3-214ENST00000567572 DNAJC19Q96DA6 116 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 PSD3Q9NYI0 1048 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 PCDHA12Q9UN75 941 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 DOCK1Q14185 1865 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 SPDYE3A6NKU9 549 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 ATP1A1P05023 1023 aaKnown RBP19.59■□□□□ 0.73
CMTM3-214ENST00000567572 KLK7P49862 253 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 USP14P54578 494 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 SLFN12Q8IYM2 578 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 KIAA1683Q9H0B3 1180 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 VIPAS39Q9H9C1 493 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.59■□□□□ 0.73
CMTM3-214ENST00000567572 JRKLQ9Y4A0 524 aa19.59■□□□□ 0.73
CMTM3-214ENST00000567572 SSU72P8A0A1W2PR75 194 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 IDEP14735 1019 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 VSNL1P62760 191 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 COASYQ13057 564 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 FAM26FQ5R3K3 315 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 NBPF12Q5TAG4 269 aaPredicted RBP19.58■□□□□ 0.72
CMTM3-214ENST00000567572 NCAPH2Q6IBW4 605 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 PPP4R3CPQ6ZMV5 832 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 DYMQ7RTS9 669 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 ZNF572Q7Z3I7 529 aaPredicted RBP19.58■□□□□ 0.72
CMTM3-214ENST00000567572 CCDC65Q8IXS2 484 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 LPAR1Q92633 364 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 FBXO28Q9NVF7 368 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 GPRC5DQ9NZD1 345 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 SMCHD1A6NHR9 2005 aa19.58■□□□□ 0.72
CMTM3-214ENST00000567572 PITPNM2Q9BZ72 1349 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 TBX3O15119 743 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 MARCH6O60337 910 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 TACC1O75410 805 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 LMNB1P20700 586 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 HOXA13P31271 388 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-214ENST00000567572 MAPK8IP2Q13387 824 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-214ENST00000567572 Q4G0T1 1027 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 CCDC174Q6PII3 467 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 APOBEC3FQ8IUX4 373 aaKnown RBP19.57■□□□□ 0.72
CMTM3-214ENST00000567572 NOA1Q8NC60 698 aaKnown RBP19.57■□□□□ 0.72
CMTM3-214ENST00000567572 HPS3Q969F9 1004 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 LACRTQ9GZZ8 138 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 SPON1Q9HCB6 807 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 ABCB6Q9NP58 842 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 COL4A3BPQ9Y5P4 624 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 WDR46O15213 610 aaKnown RBP19.57■□□□□ 0.72
CMTM3-214ENST00000567572 PJA2O43164 708 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 RHOXF2BP0C7M4 288 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 CIITAP33076 1130 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 HAUS3Q68CZ6 603 aa19.57■□□□□ 0.72
CMTM3-214ENST00000567572 ZC3H3Q8IXZ2 948 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms