RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 CYP8B1Q9UNU6 501 aa10.66□□□□□ -0.7
CFDP1-206ENST00000566254 PA2G4Q9UQ80 394 aaKnown RBP10.66□□□□□ -0.7
CFDP1-206ENST00000566254 LOC285556D6RIA3 1793 aa10.66□□□□□ -0.7
CFDP1-206ENST00000566254 TTC28Q96AY4 2481 aa10.66□□□□□ -0.7
CFDP1-206ENST00000566254 MYH13Q9UKX3 1938 aa10.66□□□□□ -0.7
CFDP1-206ENST00000566254 SALL1Q9NSC2 1324 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 LINC01387J3KSC0 135 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 GNAI3P08754 354 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 GMPRP36959 345 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 BTDP43251 543 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 RARSP54136 660 aaKnown RBP10.65□□□□□ -0.7
CFDP1-206ENST00000566254 IRX3P78415 501 aaPredicted RBP10.65□□□□□ -0.7
CFDP1-206ENST00000566254 PDE3AQ14432 1141 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 RRP1BQ14684 758 aaKnown RBP10.65□□□□□ -0.7
CFDP1-206ENST00000566254 TXNDC11Q6PKC3 985 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 LYPD4Q6UWN0 246 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 WFDC8Q8IUA0 241 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 TRIM42Q8IWZ5 723 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 UBXN4Q92575 508 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 NT5C1AQ9BXI3 368 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 SUPT16HQ9Y5B9 1047 aaKnown RBP10.65□□□□□ -0.7
CFDP1-206ENST00000566254 PCDHB5Q9Y5E4 795 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 CDH23Q9H251 3354 aa10.65□□□□□ -0.7
CFDP1-206ENST00000566254 MAST2Q6P0Q8 1798 aa10.65□□□□□ -0.71
CFDP1-206ENST00000566254 MUC3AQ02505 3323 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 SRGAP3O43295 1099 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 CELA2BP08218 269 aaPredicted RBP10.64□□□□□ -0.71
CFDP1-206ENST00000566254 ATF4P18848 351 aaPredicted RBP10.64□□□□□ -0.71
CFDP1-206ENST00000566254 IL15P40933 162 aaPredicted RBP10.64□□□□□ -0.71
CFDP1-206ENST00000566254 PHKA1P46020 1223 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 RFX5P48382 616 aaPredicted RBP10.64□□□□□ -0.71
CFDP1-206ENST00000566254 RTP1P59025 263 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 SNAP47Q5SQN1 464 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 GORABQ5T7V8 394 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 ATG9AQ7Z3C6 839 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 DZIP1Q86YF9 867 aaKnown RBP10.64□□□□□ -0.71
CFDP1-206ENST00000566254 TRMT2AQ8IZ69 625 aaKnown RBP10.64□□□□□ -0.71
CFDP1-206ENST00000566254 USP38Q8NB14 1042 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 GOLM1Q8NBJ4 401 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 GPRC5AQ8NFJ5 357 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 SLC7A3Q8WY07 619 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 USP6NLQ92738 828 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 WNT8BQ93098 351 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 P2RX7Q99572 595 aaKnown RBP10.64□□□□□ -0.71
CFDP1-206ENST00000566254 MEIS3Q99687 375 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 EMILIN2Q9BXX0 1053 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 OSBPL5Q9H0X9 879 aaPredicted RBP10.64□□□□□ -0.71
CFDP1-206ENST00000566254 PORCNQ9H237 461 aa10.64□□□□□ -0.71
CFDP1-206ENST00000566254 CIAO1O76071 339 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 MAPK4P31152 587 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 CAP2P40123 477 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 RGS2P41220 211 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 HERVK_113P62684 666 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 SMAD3P84022 425 aaKnown RBP10.63□□□□□ -0.71
CFDP1-206ENST00000566254 HNRNPUQ00839 825 aaKnown RBP eCLIP10.63□□□□□ -0.71
CFDP1-206ENST00000566254 ZNF252P-AS1Q0IIN9 211 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 C19orf57Q0VDD7 668 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 AP3B2Q13367 1082 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 LRRC14Q15048 493 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 FAM117BQ6P1L5 589 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 GPR142Q7Z601 462 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 CCAR1Q8IX12 1150 aaKnown RBP10.63□□□□□ -0.71
CFDP1-206ENST00000566254 GRIN3AQ8TCU5 1115 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 BADQ92934 168 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 SPATA32Q96LK8 384 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 NEUROD6Q96NK8 337 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 APBA2Q99767 749 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 PRDM5Q9NQX1 630 aaPredicted RBP10.63□□□□□ -0.71
CFDP1-206ENST00000566254 FLRT1Q9NZU1 646 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 RBPJLQ9UBG7 517 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 ABCF2Q9UG63 623 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 DENND2AQ9ULE3 1009 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 ATP11BQ9Y2G3 1177 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 LTBP2Q14767 1821 aa10.63□□□□□ -0.71
CFDP1-206ENST00000566254 TMEM265A0A087WTH1 108 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 FSCN2O14926 492 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 ATP2B1P20020 1258 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 PLA2G5P39877 138 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 RHBDL3P58872 404 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 ERVK-24P63145 666 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 GSTM4Q03013 218 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 COL9A3Q14050 684 aaPredicted RBP10.62□□□□□ -0.71
CFDP1-206ENST00000566254 LLGL2Q6P1M3 1020 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 PLEKHH3Q7Z736 793 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 PDZD3Q86UT5 571 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 MCF2L2Q86YR7 1114 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 PAGR1Q9BTK6 254 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 MIR1-1HGQ9H1L0 117 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 CBX8Q9HC52 389 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 OSGEPQ9NPF4 335 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 UBP1Q9NZI7 540 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 DDX20Q9UHI6 824 aaKnown RBP10.62□□□□□ -0.71
CFDP1-206ENST00000566254 MYH2Q9UKX2 1941 aa10.62□□□□□ -0.71
CFDP1-206ENST00000566254 DNAH12Q6ZR08 3092 aa10.61□□□□□ -0.71
CFDP1-206ENST00000566254 MROH7-TTC4A0A0A0MT08 1334 aa10.61□□□□□ -0.71
CFDP1-206ENST00000566254 DNM1LO00429 736 aa10.61□□□□□ -0.71
CFDP1-206ENST00000566254 EIF4EBP3O60516 100 aaPredicted RBP10.61□□□□□ -0.71
CFDP1-206ENST00000566254 BCAR3O75815 825 aa10.61□□□□□ -0.71
CFDP1-206ENST00000566254 WFS1O76024 890 aa10.61□□□□□ -0.71
CFDP1-206ENST00000566254 FGRP09769 529 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms