RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 AFAP1L1Q8TED9 768 aa17.93■□□□□ 0.46
USB1-208ENST00000563207 INPP4AQ96PE3 977 aaPredicted RBP17.93■□□□□ 0.46
USB1-208ENST00000563207 LGALS2P05162 132 aa17.92■□□□□ 0.46
USB1-208ENST00000563207 ACTN1P12814 892 aa17.92■□□□□ 0.46
USB1-208ENST00000563207 WDR5P61964 334 aaKnown RBP17.92■□□□□ 0.46
USB1-208ENST00000563207 SP4Q02446 784 aa17.92■□□□□ 0.46
USB1-208ENST00000563207 PFKFB3Q16875 520 aaPredicted RBP17.92■□□□□ 0.46
USB1-208ENST00000563207 PPP1R18Q6NYC8 613 aa17.92■□□□□ 0.46
USB1-208ENST00000563207 KCNV1Q6PIU1 500 aa17.92■□□□□ 0.46
USB1-208ENST00000563207 HERC6Q8IVU3 1022 aa17.92■□□□□ 0.46
USB1-208ENST00000563207 FAM177A1Q8N128 213 aaPredicted RBP17.92■□□□□ 0.46
USB1-208ENST00000563207 SMARCC2Q8TAQ2 1214 aa17.92■□□□□ 0.46
USB1-208ENST00000563207 CAGE1Q8TC20 777 aa17.92■□□□□ 0.46
USB1-208ENST00000563207 ATP9AO75110 1047 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 DEXIO95424 95 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 TGFB3P10600 412 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 SCG2P13521 617 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 ICAM3P32942 547 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 TAP1Q03518 808 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 RBL2Q08999 1139 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 PTK7Q13308 1070 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 MICALL1Q8N3F8 863 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 CCDC12Q8WUD4 166 aaPredicted RBP17.91■□□□□ 0.46
USB1-208ENST00000563207 GPR20Q99678 358 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 LLPHQ9BRT6 129 aaKnown RBP17.91■□□□□ 0.46
USB1-208ENST00000563207 KATNAL1Q9BW62 490 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 SLC26A6Q9BXS9 759 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 GLT8D2Q9H1C3 349 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 BARHL2Q9NY43 387 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 STK36Q9NRP7 1315 aa17.91■□□□□ 0.46
USB1-208ENST00000563207 H3BRB1 525 aa17.9■□□□□ 0.46
USB1-208ENST00000563207 TREHO43280 583 aa17.9■□□□□ 0.46
USB1-208ENST00000563207 CXCL10P02778 98 aa17.9■□□□□ 0.46
USB1-208ENST00000563207 SMIM10L2AP0DMW4 78 aa17.9■□□□□ 0.46
USB1-208ENST00000563207 SMIM10L2BP0DMW5 78 aa17.9■□□□□ 0.46
USB1-208ENST00000563207 UTP14CQ5TAP6 766 aaKnown RBP17.9■□□□□ 0.46
USB1-208ENST00000563207 HEATR3Q7Z4Q2 680 aa17.9■□□□□ 0.46
USB1-208ENST00000563207 CCDC155Q8N6L0 562 aa17.9■□□□□ 0.46
USB1-208ENST00000563207 PHKBQ93100 1093 aa17.9■□□□□ 0.46
USB1-208ENST00000563207 SLC9A7Q96T83 725 aa17.9■□□□□ 0.46
USB1-208ENST00000563207 RNPEPQ9H4A4 650 aa17.9■□□□□ 0.46
USB1-208ENST00000563207 TUT1Q9H6E5 874 aaKnown RBP17.9■□□□□ 0.46
USB1-208ENST00000563207 PKD2L1Q9P0L9 805 aa17.9■□□□□ 0.46
USB1-208ENST00000563207 PIK3CDO00329 1044 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 LARGE1O95461 756 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 THPOP40225 353 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 PKN1Q16512 942 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 PCNX4Q63HM2 1172 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 TYW1BQ6NUM6 668 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.89■□□□□ 0.45
USB1-208ENST00000563207 SERINC5Q86VE9 423 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 NECAB1Q8N987 351 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 WASF1Q92558 559 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 PSTPIP2Q9H939 334 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 SH3GLB2Q9NR46 395 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 SETD4Q9NVD3 440 aa17.89■□□□□ 0.45
USB1-208ENST00000563207 FIBPO43427 364 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 ITGB5P18084 799 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 HOXC8P31273 242 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 GNPTABQ3T906 1256 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 WWC2Q6AWC2 1192 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 FAM117BQ6P1L5 589 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 CNKSR3Q6P9H4 555 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 METTL7BQ6UX53 244 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 PHOSPHO2Q8TCD6 241 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 ARNTL2Q8WYA1 636 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 CUL5Q93034 780 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 ATP6V0A1Q93050 837 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 PGBD1Q96JS3 809 aa17.88■□□□□ 0.45
USB1-208ENST00000563207 COL4A4P53420 1690 aaPredicted RBP17.87■□□□□ 0.45
USB1-208ENST00000563207 ESYT2A0FGR8 921 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 C17orf102A2RUQ5 167 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 STXBP3O00186 592 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 NOP56O00567 594 aaKnown RBP17.87■□□□□ 0.45
USB1-208ENST00000563207 TLL1O43897 1013 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 BAIAP3O94812 1187 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 CTDNEP1O95476 244 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 XBP1P17861 261 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 NAPAP54920 295 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 NEDD9Q14511 834 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 NSUN7Q8NE18 718 aaKnown RBP17.87■□□□□ 0.45
USB1-208ENST00000563207 CCDC148Q8NFR7 591 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 TMX3Q96JJ7 454 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 MTCH2Q9Y6C9 303 aa17.87■□□□□ 0.45
USB1-208ENST00000563207 MUC3AQ02505 3323 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 ADAMTS3O15072 1205 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 STAM2O75886 525 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 CTSHP09668 335 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 KCNA2P16389 499 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 GNA11P29992 359 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 KCNJ6P48051 423 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 HMGN5P82970 282 aaKnown RBP17.86■□□□□ 0.45
USB1-208ENST00000563207 TFF2Q03403 129 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 MCTP2Q6DN12 878 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 CCDC83Q8IWF9 413 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 DBF4BQ8NFT6 615 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 CYP2W1Q8TAV3 490 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 SNX21Q969T3 373 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 ZBTB10Q96DT7 871 aa17.86■□□□□ 0.45
USB1-208ENST00000563207 ORC3Q9UBD5 711 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms