RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 POTEEQ6S8J3 1075 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.36■□□□□ 0.05
TPM1-215ENST00000558868 DYMQ7RTS9 669 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 MIER3Q7Z3K6 550 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 ZSCAN30Q86W11 494 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 TRMT44Q8IYL2 757 aaKnown RBP15.36■□□□□ 0.05
TPM1-215ENST00000558868 SMYD4Q8IYR2 804 aaPredicted RBP15.36■□□□□ 0.05
TPM1-215ENST00000558868 RDM1Q8NG50 284 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 CTAGE1Q96RT6 745 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 HSD3B7Q9H2F3 369 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 UNC45AQ9H3U1 944 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 IMPACTQ9P2X3 320 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 ADD3Q9UEY8 706 aaKnown RBP15.36■□□□□ 0.05
TPM1-215ENST00000558868 GDAQ9Y2T3 454 aa15.36■□□□□ 0.05
TPM1-215ENST00000558868 CHMP2AO43633 222 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 SLITRK3O94933 977 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 IDEP14735 1019 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 SFNP31947 248 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 JAK3P52333 1124 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 STX17P56962 302 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 KRT76Q01546 638 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 NCAPG2Q86XI2 1143 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 TPH2Q8IWU9 490 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 SPC24Q8NBT2 197 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 DNAJC19Q96DA6 116 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 DYDC2Q96IM9 177 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 INPP4AQ96PE3 977 aaPredicted RBP15.35■□□□□ 0.05
TPM1-215ENST00000558868 PAGR1Q9BTK6 254 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 XPO4Q9C0E2 1151 aaKnown RBP15.35■□□□□ 0.05
TPM1-215ENST00000558868 PANK4Q9NVE7 773 aa15.35■□□□□ 0.05
TPM1-215ENST00000558868 TESPA1A2RU30 521 aaPredicted RBP15.34■□□□□ 0.05
TPM1-215ENST00000558868 ESPNB1AK53 854 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 POTEB2H3BUK9 544 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 DHX15O43143 795 aaKnown RBP15.34■□□□□ 0.05
TPM1-215ENST00000558868 CELF2O95319 508 aaKnown RBP15.34■□□□□ 0.05
TPM1-215ENST00000558868 P4HBP07237 508 aaKnown RBP15.34■□□□□ 0.05
TPM1-215ENST00000558868 CYP11B2P19099 503 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 CCNE1P24864 410 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 MSNP26038 577 aaKnown RBP15.34■□□□□ 0.05
TPM1-215ENST00000558868 GJA5P36382 358 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 GSDMDP57764 484 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 CYP4A11Q02928 519 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 STXBP2Q15833 593 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 FILIP1LQ4L180 1135 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 CDKAL1Q5VV42 579 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 GUF1Q8N442 669 aaKnown RBP15.34■□□□□ 0.05
TPM1-215ENST00000558868 SHCBP1Q8NEM2 672 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 ZFP91Q96JP5 570 aaPredicted RBP15.34■□□□□ 0.05
TPM1-215ENST00000558868 MED15Q96RN5 788 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 MOV10L1Q9BXT6 1211 aaKnown RBP15.34■□□□□ 0.05
TPM1-215ENST00000558868 MROH8Q9H579 483 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 KCND2Q9NZV8 630 aa15.34■□□□□ 0.05
TPM1-215ENST00000558868 WDR64B1ANS9 1081 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 DKC1O60832 514 aaKnown RBP eCLIP15.33■□□□□ 0.04
TPM1-215ENST00000558868 EIF3JO75822 258 aaKnown RBP15.33■□□□□ 0.04
TPM1-215ENST00000558868 CNMDO75829 334 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 FGFR1OPO95684 399 aaKnown RBP15.33■□□□□ 0.04
TPM1-215ENST00000558868 ZBTB48P10074 688 aaPredicted RBP15.33■□□□□ 0.04
TPM1-215ENST00000558868 ATP1A3P13637 1013 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 EHHADHQ08426 723 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 STK4Q13043 487 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 COASYQ13057 564 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 CTTNQ14247 550 aaKnown RBP15.33■□□□□ 0.04
TPM1-215ENST00000558868 ZNF746Q6NUN9 644 aaPredicted RBP15.33■□□□□ 0.04
TPM1-215ENST00000558868 FOXR2Q6PJQ5 311 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 ANKRD23Q86SG2 305 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 FAM114A1Q8IWE2 563 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 P2RX5Q93086 422 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 SENP7Q9BQF6 1050 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 THAP9Q9H5L6 903 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 ZSWIM4Q9H7M6 989 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 SAMSN1Q9NSI8 373 aaKnown RBP15.33■□□□□ 0.04
TPM1-215ENST00000558868 RGL1Q9NZL6 768 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 ZKSCAN5Q9Y2L8 839 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 NFASCO94856 1347 aa15.33■□□□□ 0.04
TPM1-215ENST00000558868 LOC102724159A0A0B4J2E5 919 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 FRMD3A2A2Y4 597 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 DDX39AO00148 427 aaKnown RBP15.32■□□□□ 0.04
TPM1-215ENST00000558868 LYPLA2O95372 231 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 GAP43P17677 238 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 ERCC3P19447 782 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 PSMC6P62333 389 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 CCNA1P78396 465 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 ITGB3BPQ13352 177 aaPredicted RBP15.32■□□□□ 0.04
TPM1-215ENST00000558868 PWP2Q15269 919 aaKnown RBP15.32■□□□□ 0.04
TPM1-215ENST00000558868 FAM26FQ5R3K3 315 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 SMAP1Q8IYB5 467 aaPredicted RBP15.32■□□□□ 0.04
TPM1-215ENST00000558868 TRIM47Q96LD4 638 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 TSG101Q99816 390 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 LXNQ9BS40 222 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 BHMT2Q9H2M3 363 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 SLC39A2Q9NP94 309 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 PKD2L1Q9P0L9 805 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 MAGEC2Q9UBF1 373 aaPredicted RBP15.32■□□□□ 0.04
TPM1-215ENST00000558868 RBPJLQ9UBG7 517 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 MAPK8IP1Q9UQF2 711 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 SAMM50Q9Y512 469 aa15.32■□□□□ 0.04
TPM1-215ENST00000558868 LOXHD1Q8IVV2 1947 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 CCL15-CCL14A0A0B4J2E2 113 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 ARHGEF35A5YM69 484 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms