RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CNGB3Q9NQW8 809 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 PKD2L2Q9NZM6 624 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 SEPT10Q9P0V9 454 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 DYTNA2CJ06 578 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 BLVRAP53004 296 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 TRAF7Q6Q0C0 670 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 CADPS2Q86UW7 1296 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 ZNF354CQ86Y25 554 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 SMCR8Q8TEV9 937 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 P2RX5Q93086 422 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 PCDHB6Q9Y5E3 794 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 SLC20A2Q08357 652 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 ASPHQ12797 758 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 SLC39A6Q13433 755 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 PRPSAP1Q14558 356 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 USP37Q86T82 979 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 CCNYL1Q8N7R7 359 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 GIPC3Q8TF64 312 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 FAM153AQ9UHL3 310 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 PODXLO00592 558 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 E2F6O75461 281 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 FKBP3Q00688 224 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 TMTC4Q5T4D3 741 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 FOXP4Q8IVH2 680 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 AURKCQ9UQB9 309 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 C6orf229H3BNL8 230 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 CLPTM1O96005 669 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 KRT6AP02538 564 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 KRT6BP04259 564 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 KRT6CP48668 564 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 ITGB3BPQ13352 177 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 EXOC3L4Q17RC7 722 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 SLC12A2P55011 1212 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 GSTO1P78417 241 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 MICU2Q8IYU8 434 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 STMN3Q9NZ72 180 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 VPS54Q9P1Q0 977 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 FAM187AA6NFU0 413 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 PDE5AO76074 875 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 EGFLAMQ63HQ2 1017 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 CWF19L1Q69YN2 538 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 CAAP1Q9H8G2 361 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 HAO1Q9UJM8 370 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 C16orf96A6NNT2 1141 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 F8VZ95 297 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 VIL1P09327 827 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 C21orf59P57076 290 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 CALML6Q8TD86 181 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 GIMAP4Q9NUV9 329 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 NDE1Q9NXR1 346 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 DBNLQ9UJU6 430 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 TEDDM1Q5T9Z0 273 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 IL17REQ8NFR9 667 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 NDST4Q9H3R1 872 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 STRIP2Q9ULQ0 834 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 SGK1O00141 431 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 ECEL1O95672 775 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 MFAP3P55082 362 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 PLCB4Q15147 1175 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 FSCBQ5H9T9 825 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 RSRC2Q7L4I2 434 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 ZNF579Q8NAF0 562 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 LSM1O15116 133 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 INHBAP08476 426 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 ACTN1P12814 892 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 CYP2J2P51589 502 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 CC2D2BQ6DHV5 1058 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 FAM192AQ9GZU8 254 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 DPPA5A6NC42 116 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 GOLGA8SH3BPF8 625 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 GOLGA8MH3BSY2 632 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 GSPT1P15170 499 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 SLC29A2Q14542 456 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 RCSD1Q6JBY9 416 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 TLR7Q9NYK1 1049 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 KIAA1024Q9UPX6 916 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 GOLPH3LQ9H4A5 285 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 AGPAT5Q9NUQ2 364 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 TRIM10Q9UDY6 481 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 TRIM43BA6NCK2 446 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 GOLGA8HP0CJ92 632 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 GJA8P48165 433 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 NDEL1Q9GZM8 345 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 METTL5Q9NRN9 209 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 DCTN3O75935 186 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 APOL6Q9BWW8 343 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 ABCF3Q9NUQ8 709 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 SRPRBQ9Y5M8 271 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 GHRP10912 638 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 PTPREP23469 700 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 CASP1P29466 404 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 HABP4Q5JVS0 413 aaKnown RBP3.97□□□□□ -1.77
ATXN3-248ENST00000558190 OGFOD1Q8N543 542 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 CYGBQ8WWM9 190 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 CFAP36Q96G28 342 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 USP17L12C9JPN9 530 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 USP17L21D6R901 530 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 EYA2O00167 538 aa3.97□□□□□ -1.77
ATXN3-248ENST00000558190 PPIP5K2O43314 1243 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms