RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CCDC94Q9BW85 323 aaPredicted RBP18.91■□□□□ 0.62
PTPN21-208ENST00000556564 ASB14A6NK59 587 aa18.91■□□□□ 0.62
PTPN21-208ENST00000556564 MXRA7P84157 204 aa18.91■□□□□ 0.62
PTPN21-208ENST00000556564 PPP2R5CQ13362 524 aa18.91■□□□□ 0.62
PTPN21-208ENST00000556564 RIC8AQ9NPQ8 531 aa18.91■□□□□ 0.62
PTPN21-208ENST00000556564 WDR19Q8NEZ3 1342 aa18.91■□□□□ 0.62
PTPN21-208ENST00000556564 ITIH3Q06033 890 aa18.91■□□□□ 0.62
PTPN21-208ENST00000556564 TWF2Q6IBS0 349 aaKnown RBP18.91■□□□□ 0.62
PTPN21-208ENST00000556564 POLR2BP30876 1174 aaKnown RBP18.91■□□□□ 0.62
PTPN21-208ENST00000556564 AGBL3Q8NEM8 1001 aa18.91■□□□□ 0.62
PTPN21-208ENST00000556564 UBE2TQ9NPD8 197 aaPredicted RBP18.91■□□□□ 0.62
PTPN21-208ENST00000556564 EVCP57679 992 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 GDAQ9Y2T3 454 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 C19orf81C9J6K1 198 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 E9PMD0 336 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 CRCPO75575 148 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 COPB2P35606 906 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 KRT76Q01546 638 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 DPCR1Q3MIW9 517 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 ARL6IP4Q66PJ3 421 aaKnown RBP18.9■□□□□ 0.62
PTPN21-208ENST00000556564 RBM46Q8TBY0 533 aaKnown RBP18.9■□□□□ 0.62
PTPN21-208ENST00000556564 MIS12Q9H081 205 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 WDR46O15213 610 aaKnown RBP18.9■□□□□ 0.62
PTPN21-208ENST00000556564 CYP2B6P20813 491 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 GEN1Q17RS7 908 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 PADI6Q6TGC4 694 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 PHLDB2Q86SQ0 1253 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 CCDC51Q96ER9 411 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 NDUFB10O96000 172 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 FBXO41Q8TF61 875 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 TIGD1Q96MW7 591 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 GCNT4Q9P109 453 aa18.9■□□□□ 0.62
PTPN21-208ENST00000556564 UBE2Q2LH0YL09 131 aa18.89■□□□□ 0.62
PTPN21-208ENST00000556564 ZKSCAN4Q969J2 545 aaPredicted RBP18.89■□□□□ 0.62
PTPN21-208ENST00000556564 FAM149B1Q96BN6 582 aa18.89■□□□□ 0.62
PTPN21-208ENST00000556564 SRBD1Q8N5C6 995 aaKnown RBP18.89■□□□□ 0.61
PTPN21-208ENST00000556564 TMEM106CQ9BVX2 250 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 NSRP1Q9H0G5 558 aaKnown RBP18.89■□□□□ 0.61
PTPN21-208ENST00000556564 PRDM10Q9NQV6 1147 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 POTEB3A0JP26 581 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 POTECB2RU33 542 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 POTEBQ6S5H4 581 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 C16orf86Q6ZW13 317 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 KIF9Q9HAQ2 790 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 TDP2O95551 362 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 PHKA2P46019 1235 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 ADAT2Q7Z6V5 191 aaKnown RBP18.89■□□□□ 0.61
PTPN21-208ENST00000556564 TAB3Q8N5C8 712 aaPredicted RBP18.89■□□□□ 0.61
PTPN21-208ENST00000556564 HEXIM2Q96MH2 286 aaKnown RBP18.89■□□□□ 0.61
PTPN21-208ENST00000556564 RRAGCQ9HB90 399 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 RCOR1Q9UKL0 485 aa18.89■□□□□ 0.61
PTPN21-208ENST00000556564 IPO5O00410 1097 aaKnown RBP18.88■□□□□ 0.61
PTPN21-208ENST00000556564 KCNK3O14649 394 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 SLC16A4O15374 487 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 TXNP10599 105 aaKnown RBP18.88■□□□□ 0.61
PTPN21-208ENST00000556564 EPHX2P34913 555 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTPN21-208ENST00000556564 GOLGA8FQ08AF8 430 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 GOLGA8DPQ0D2H9 430 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 CUL4BQ13620 913 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 POLIQ9UNA4 740 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 ANXA13P27216 316 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 A6NJR5 290 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 GOLGA8SH3BPF8 625 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 PSMD2Q13200 908 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 STOX1Q6ZVD7 989 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 FDX1P10109 184 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 RFX5P48382 616 aaPredicted RBP18.88■□□□□ 0.61
PTPN21-208ENST00000556564 C11orf57Q6ZUT1 292 aaPredicted RBP18.88■□□□□ 0.61
PTPN21-208ENST00000556564 CEP57Q86XR8 500 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 RAB3IL1Q8TBN0 382 aa18.88■□□□□ 0.61
PTPN21-208ENST00000556564 ZNF512BQ96KM6 892 aaPredicted RBP18.88■□□□□ 0.61
PTPN21-208ENST00000556564 POTEFA5A3E0 1075 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 POTEIP0CG38 1075 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 CETPP11597 493 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 ELF1P32519 619 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 GTF2F1P35269 517 aaKnown RBP eCLIP18.87■□□□□ 0.61
PTPN21-208ENST00000556564 BPIFB4P59827 614 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 POTEGQ6S5H5 508 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 POTEEQ6S8J3 1075 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 SRGNP10124 158 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 CFAP221Q4G0U5 840 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 CFAP157Q5JU67 520 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 LPAR1Q92633 364 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 IFNB1P01574 187 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 BAATQ14032 418 aaPredicted RBP18.87■□□□□ 0.61
PTPN21-208ENST00000556564 CARD6Q9BX69 1037 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 FKBP3Q00688 224 aaKnown RBP18.87■□□□□ 0.61
PTPN21-208ENST00000556564 TSKSQ9UJT2 592 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 ATP8B3O60423 1300 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 RNF8O76064 485 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 GUCY1A2P33402 732 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 MAPK6Q16659 721 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 ZNF568Q3ZCX4 644 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 SBK1Q52WX2 424 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 HS1BP3Q53T59 392 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 SLFN12LQ6IEE8 588 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 RAD54LQ92698 747 aa18.87■□□□□ 0.61
PTPN21-208ENST00000556564 POLR3FQ9H1D9 316 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms