RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 DNAJC17Q9NVM6 304 aaKnown RBP11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 BSDC1Q9NW68 430 aaPredicted RBP11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 FBXL5Q9UKA1 691 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 CNTNAP5Q8WYK1 1306 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 MYO5BQ9ULV0 1848 aa11.13□□□□□ -0.63
SMARCC2-209ENST00000550164 CCDC188H7C350 402 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 DAPK3O43293 454 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 GAS7O60861 476 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 MDM2Q00987 491 aaPredicted RBP11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 SNX1Q13596 522 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 ARMC9Q7Z3E5 817 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 STMN2Q93045 179 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 CCDC127Q96BQ5 260 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 FAM212AQ96EL1 285 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 SPATA31A3Q5VYP0 1347 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 SLIT1O75093 1534 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 RIMS1Q86UR5 1692 aaKnown RBP11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 SFI1A8K8P3 1242 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 USP17L5A8MUK1 530 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 MYO1FO00160 1098 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 ABL1P00519 1130 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 MMEP08473 750 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 NT5DC1Q5TFE4 455 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 CCDC13Q8IYE1 715 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 PPFIBP2Q8ND30 876 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 ZNF473Q8WTR7 871 aaKnown RBP11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 GOLPH3Q9H4A6 298 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 CNOT10Q9H9A5 744 aaKnown RBP11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 IFNB1P01574 187 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 MDH1P40925 334 aaKnown RBP11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 PPP2R2AP63151 447 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 ZNF211Q13398 564 aaPredicted RBP11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 TBC1D10BQ4KMP7 808 aaPredicted RBP11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 ASPRV1Q53RT3 343 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 ODR4Q5SWX8 454 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 DDX42Q86XP3 938 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 FAM84BQ96KN1 310 aaPredicted RBP11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 DNAJC7Q99615 494 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 IMPG2Q9BZV3 1241 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 EPN3Q9H201 632 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 VPS37BQ9H9H4 285 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 TBK1Q9UHD2 729 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 PASKQ96RG2 1323 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 SPATA31D1Q6ZQQ2 1576 aa11.12□□□□□ -0.63
SMARCC2-209ENST00000550164 RASGRF2O14827 1237 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 ORC4O43929 436 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 HARSP12081 509 aaKnown RBP11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 DESP17661 470 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 GRM4Q14833 912 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 PAPD7Q5XG87 772 aaKnown RBP11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 RAD54LQ92698 747 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 SMC6Q96SB8 1091 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 PSMD1Q99460 953 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 KLC4Q9NSK0 619 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 OVOS2A0A0G2JMS6 1433 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 PMS1P54277 932 aaKnown RBP11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 C10orf76Q5T2E6 689 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 FYB2Q5VWT5 728 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 PROM2Q8N271 834 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 MMGT1Q8N4V1 131 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 TBC1D22AQ8WUA7 517 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 MCUR1Q96AQ8 359 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 RNPC3Q96LT9 517 aaKnown RBP11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 FNBP1Q96RU3 617 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 NCAPGQ9BPX3 1015 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 CEP83Q9Y592 693 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 SART1O43290 800 aaKnown RBP11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 HNRNPH1P31943 449 aaKnown RBP11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 TMEM139Q8IV31 216 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 HDAC7Q8WUI4 952 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 HVCN1Q96D96 273 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 EHD4Q9H223 541 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 BHMT2Q9H2M3 363 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 POTECB2RU33 542 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 ACSL3O95573 720 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 TMOD1P28289 359 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 EIF3BP55884 814 aaKnown RBP11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 SESN3P58005 492 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 MYL7Q01449 175 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 POTEBQ6S5H4 581 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 GDAP1Q8TB36 358 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 C8orf37Q96NL8 207 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 MLXIPLQ9NP71 852 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 PLAGL2Q9UPG8 496 aa11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 NOC2LQ9Y3T9 749 aaKnown RBP11.11□□□□□ -0.63
SMARCC2-209ENST00000550164 MYMKA6NI61 221 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 GCFC2P16383 781 aaKnown RBP11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 KLRC1P26715 233 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 TSNAXIP1Q2TAA8 658 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 WDR44Q5JSH3 913 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 NUGGCQ68CJ6 796 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 SLFN13Q68D06 897 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 PDXDC2PQ6P474 469 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 DPH6Q7L8W6 267 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 RBM17Q96I25 401 aaKnown RBP11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 RUNDC3BQ96NL0 473 aa11.1□□□□□ -0.63
SMARCC2-209ENST00000550164 CDCA7Q9BWT1 371 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms