RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 NLRP4Q96MN2 994 aa8.59□□□□□ -1.03
LRP6-206ENST00000543091 KIF2CQ99661 725 aa8.59□□□□□ -1.03
LRP6-206ENST00000543091 TUFT1Q9NNX1 390 aa8.59□□□□□ -1.03
LRP6-206ENST00000543091 MYH14Q7Z406 1995 aaKnown RBP8.59□□□□□ -1.03
LRP6-206ENST00000543091 MAGEB2O15479 319 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 AKR1B10O60218 316 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 PLA2G6O60733 806 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 PGK2P07205 417 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 FGRP09769 529 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 PSMD2Q13200 908 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 PNOCQ13519 176 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 MCM6Q14566 821 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 SYTL5Q8TDW5 730 aaPredicted RBP8.58□□□□□ -1.04
LRP6-206ENST00000543091 LXNQ9BS40 222 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 C2orf40Q9H1Z8 148 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 ABHD16BQ9H3Z7 469 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 LMBRD1Q9NUN5 540 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 KPNA6O60684 536 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 N4BP1O75113 896 aaKnown RBP8.58□□□□□ -1.04
LRP6-206ENST00000543091 GADD45BO75293 160 aaPredicted RBP8.58□□□□□ -1.04
LRP6-206ENST00000543091 PRPF6O94906 941 aaKnown RBP8.58□□□□□ -1.04
LRP6-206ENST00000543091 CDC25AP30304 524 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 CYP2J2P51589 502 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 ATP2C1P98194 919 aaPredicted RBP8.58□□□□□ -1.04
LRP6-206ENST00000543091 UBXN1Q04323 297 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 NFX1Q12986 1120 aaKnown RBP8.58□□□□□ -1.04
LRP6-206ENST00000543091 SLC9C1Q4G0N8 1177 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 CCDC181Q5TID7 509 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 PADI6Q6TGC4 694 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 KCTD17Q8N5Z5 321 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 BANK1Q8NDB2 785 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 VTA1Q9NP79 307 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 ARHGEF37A1IGU5 675 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 KRT19P08727 400 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 HOXC6P09630 235 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 ADORA2AP29274 412 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 PPFIA1Q13136 1202 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 FAM110CQ1W6H9 321 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 UBE2Q2Q8WVN8 375 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 TAF4BQ92750 862 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 MTRQ99707 1265 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 FTOQ9C0B1 505 aaKnown RBP eCLIP8.58□□□□□ -1.04
LRP6-206ENST00000543091 RANBP17Q9H2T7 1088 aaKnown RBP8.58□□□□□ -1.04
LRP6-206ENST00000543091 EMILIN3Q9NT22 766 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 ANKFY1Q9P2R3 1169 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 NFIBO00712 420 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 NEBLO76041 1014 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 TMEM191BP0C7N4 346 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 SRGAP2CP0DJJ0 459 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 TGFB3P10600 412 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.58□□□□□ -1.04
LRP6-206ENST00000543091 EIF2AK1Q9BQI3 630 aaKnown RBP8.58□□□□□ -1.04
LRP6-206ENST00000543091 PDCD2LQ9BRP1 358 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 ERAP1Q9NZ08 941 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 TJP1Q07157 1748 aa8.58□□□□□ -1.04
LRP6-206ENST00000543091 RRN3P2A6NIE6 340 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 ZSCAN12O43309 604 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 SREBF1P36956 1147 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 MAPK6Q16659 721 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 SLFN12LQ6IEE8 588 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 SH3BP5LQ7L8J4 393 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 CCDC94Q9BW85 323 aaPredicted RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 GCOM2Q9BZD3 368 aaPredicted RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 ARMCX3Q9UH62 379 aaPredicted RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 NUP188Q5SRE5 1749 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 ZBTB22O15209 634 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 MSCO60682 206 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 APLP1P51693 650 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 SNX16P57768 344 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 ZNF746Q6NUN9 644 aaPredicted RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 BTNL9Q6UXG8 535 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 PIGOQ8TEQ8 1089 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 TIPINQ9BVW5 301 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 HMX1Q9NP08 348 aaPredicted RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 SLC39A2Q9NP94 309 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 KCNH7Q9NS40 1196 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 SPDYE16A6NNV3 312 aaPredicted RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 RPLP2P05387 115 aaKnown RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 XRCC5P13010 732 aaKnown RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 SURF1Q15526 300 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.57□□□□□ -1.042e-7■■■■■ 120.7
LRP6-206ENST00000543091 PXMP2Q9NR77 195 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 SEL1LQ9UBV2 794 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 PARP2Q9UGN5 583 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 SNCAIPQ9Y6H5 919 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 BTBD19C9JJ37 291 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 HBP1O60381 514 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 AKR1A1P14550 325 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 CLCN1P35523 988 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 CYLC1P35663 651 aaPredicted RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 PPP2R3AQ06190 1150 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 VWA3BQ502W6 1294 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 PCNX4Q63HM2 1172 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 EPSTI1Q96J88 318 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 LBHD1Q9BQE6 289 aaPredicted RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.57□□□□□ -1.04
LRP6-206ENST00000543091 MYO6Q9UM54 1294 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 NFE2L3Q9Y4A8 694 aa8.57□□□□□ -1.04
LRP6-206ENST00000543091 AFG3L2Q9Y4W6 797 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms