RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 RAD54LQ92698 747 aa13.83□□□□□ -0.2
RNF4-222ENST00000541204 MTMR8Q96EF0 704 aa13.83□□□□□ -0.2
RNF4-222ENST00000541204 ANO3Q9BYT9 981 aa13.83□□□□□ -0.2
RNF4-222ENST00000541204 VEZTQ9HBM0 779 aa13.83□□□□□ -0.2
RNF4-222ENST00000541204 EHD2Q9NZN4 543 aa13.83□□□□□ -0.2
RNF4-222ENST00000541204 DMGDHQ9UI17 866 aaKnown RBP13.83□□□□□ -0.2
RNF4-222ENST00000541204 GOLGA6BA6NDN3 693 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 LRRC53A6NM62 1247 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 HNRNPH3P31942 346 aaKnown RBP13.82□□□□□ -0.2
RNF4-222ENST00000541204 PPP1R2P41236 205 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 CC2D2BQ6DHV5 1058 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 PPP4R3AQ6IN85 833 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 CCDC70Q6NSX1 233 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 MIGA2Q7L4E1 593 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 RRAGAQ7L523 313 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 AENQ8WTP8 325 aaKnown RBP13.82□□□□□ -0.2
RNF4-222ENST00000541204 DCAF4Q8WV16 495 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 MKL1Q969V6 931 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.82□□□□□ -0.2
RNF4-222ENST00000541204 FAM184BQ9ULE4 1060 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 KIAA1024Q9UPX6 916 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 QSER1Q2KHR3 1735 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 MYH10P35580 1976 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 NPHP3-ACAD11A0A0J9YXS1 232 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 AKR1B10O60218 316 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 HDLBPQ00341 1268 aaKnown RBP13.82□□□□□ -0.2
RNF4-222ENST00000541204 SND1Q7KZF4 910 aaKnown RBP eCLIP13.82□□□□□ -0.2
RNF4-222ENST00000541204 MMGT1Q8N4V1 131 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 ANKRD13CQ8N6S4 541 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 SPATA4Q8NEY3 305 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 OSBPL9Q96SU4 736 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 ZHX3Q9H4I2 956 aa13.82□□□□□ -0.2
RNF4-222ENST00000541204 POTEB3A0JP26 581 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 POTECB2RU33 542 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 MEIS2O14770 477 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 NCK2O43639 380 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 PDIA5Q14554 519 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 POTEBQ6S5H4 581 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 SLC30A10Q6XR72 485 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 LARGE2Q8N3Y3 721 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 ACER1Q8TDN7 264 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 MRIQ9BWK5 157 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 SALL4Q9UJQ4 1053 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 ATF5Q9Y2D1 282 aaPredicted RBP13.81□□□□□ -0.2
RNF4-222ENST00000541204 MYH4Q9Y623 1939 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 ORC2Q13416 577 aaPredicted RBP13.81□□□□□ -0.2
RNF4-222ENST00000541204 COBLL1Q53SF7 1204 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 CCDC84Q86UT8 332 aaPredicted RBP13.81□□□□□ -0.2
RNF4-222ENST00000541204 FBXO11Q86XK2 927 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 CCDC155Q8N6L0 562 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 AMNQ9BXJ7 453 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 STK17AQ9UEE5 414 aa13.81□□□□□ -0.2
RNF4-222ENST00000541204 GOLGA6CA6NDK9 693 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 MEIS1O00470 390 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 PPFIA4O75335 1185 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 GOLGA6DP0CG33 693 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 BMP3P12645 472 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 MAN2A1Q16706 1144 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 SYDE2Q5VT97 1194 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 UNC13DQ70J99 1090 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 FAM76AQ8TAV0 307 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 POLD4Q9HCU8 107 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 GOLGA6AQ9NYA3 693 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 LCA5LO95447 670 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 FKBP1AP62942 108 aaKnown RBP13.8□□□□□ -0.2
RNF4-222ENST00000541204 ARHGAP4P98171 946 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 GFPT1Q06210 699 aaPredicted RBP13.8□□□□□ -0.2
RNF4-222ENST00000541204 KIAA1755Q5JYT7 1200 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 CYP2W1Q8TAV3 490 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 IQCDQ96DY2 449 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 ALS2CR12Q96Q35 445 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 FGFBP2Q9BYJ0 223 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 TMOD2Q9NZR1 351 aa13.8□□□□□ -0.2
RNF4-222ENST00000541204 POTEFA5A3E0 1075 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 POTEIP0CG38 1075 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 MAGEA1P43355 309 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 DLGAP5Q15398 846 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 CCDC181Q5TID7 509 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 CCDC174Q6PII3 467 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 POTEGQ6S5H5 508 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 POTEEQ6S8J3 1075 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 DEFB132Q7Z7B7 95 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 HYOU1Q9Y4L1 999 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 SPDYE3A6NKU9 549 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 BUB1O43683 1085 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 PRLRP16471 622 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 UBXN2AP68543 259 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 RASSF7Q02833 373 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 TMEM119Q4V9L6 283 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 ZNF572Q7Z3I7 529 aaPredicted RBP13.79□□□□□ -0.2
RNF4-222ENST00000541204 NELFCDQ8IXH7 590 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 TTLL6Q8N841 843 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 BAP1Q92560 729 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 CAMKK2Q96RR4 588 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 TANGO6Q9C0B7 1094 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 TMEM39BQ9GZU3 492 aa13.79□□□□□ -0.2
RNF4-222ENST00000541204 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
RNF4-222ENST00000541204 ENTPD3O75355 529 aa13.78□□□□□ -0.2
RNF4-222ENST00000541204 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
RNF4-222ENST00000541204 TCP1P17987 556 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms