RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 RNF10Q8N5U6 811 aaKnown RBP14.15□□□□□ -0.14
MSH6-210ENST00000540021 GLIS3Q8NEA6 775 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 CYFIP2Q96F07 1278 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 FMO2Q99518 471 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 STK17AQ9UEE5 414 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 CHD2O14647 1828 aaKnown RBP14.15□□□□□ -0.14
MSH6-210ENST00000540021 TTI1O43156 1089 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 DPP8Q6V1X1 898 aaPredicted RBP14.15□□□□□ -0.14
MSH6-210ENST00000540021 KCTD1Q719H9 257 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 HS2ST1Q7LGA3 356 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 KAT2BQ92831 832 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 RAB17Q9H0T7 212 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 PSTPIP2Q9H939 334 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 SLAIN2Q9P270 581 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 DNM3Q9UQ16 869 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 UFL1O94874 794 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 CCDC38Q502W7 563 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 GUF1Q8N442 669 aaKnown RBP14.15□□□□□ -0.14
MSH6-210ENST00000540021 MYCT1Q8N699 235 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 KIAA0895Q8NCT3 520 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 WDR66Q8TBY9 1149 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 TRIM51Q9BSJ1 452 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 NOC2LQ9Y3T9 749 aaKnown RBP14.15□□□□□ -0.14
MSH6-210ENST00000540021 DAAM1Q9Y4D1 1078 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 PPP2R2AP63151 447 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 MEA1Q16626 185 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 TBC1D10BQ4KMP7 808 aaPredicted RBP14.14□□□□□ -0.15
MSH6-210ENST00000540021 KLHDC7AQ5VTJ3 777 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 RPAINQ86UA6 219 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 CCDC13Q8IYE1 715 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 HVCN1Q96D96 273 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 SHISA4Q96DD7 197 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 ASIC3Q9UHC3 531 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 ZBTB21Q9ULJ3 1066 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 ABCC6O95255 1503 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 POTEB3A0JP26 581 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 ANKRD62A6NC57 917 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 POTECB2RU33 542 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 GNPATO15228 680 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 POTEBQ6S5H4 581 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 SYCE1Q8N0S2 351 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 CUL5Q93034 780 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 THOC1Q96FV9 657 aaKnown RBP14.14□□□□□ -0.15
MSH6-210ENST00000540021 SH3GLB2Q9NR46 395 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 ORC4O43929 436 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 GNA14O95837 355 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 PLA2G4BP0C869 781 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 CETN1Q12798 172 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 GRM4Q14833 912 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 PPP2R5AQ15172 486 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 ZNF34Q8IZ26 560 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 C7orf25Q9BPX7 421 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 GCNT4Q9P109 453 aa14.14□□□□□ -0.15
MSH6-210ENST00000540021 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
MSH6-210ENST00000540021 UBR1Q8IWV7 1749 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 TNS3Q68CZ2 1445 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 STXBP3O00186 592 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 MMEP08473 750 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 SLC9A1P19634 815 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 HSD17B3P37058 310 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 LRRC14Q15048 493 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 SEL1L2Q5TEA6 688 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 TRIM68Q6AZZ1 485 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 RAD54LQ92698 747 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 NT5C3AQ9H0P0 336 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 SLC40A1Q9NP59 571 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 CALUO43852 315 aaPredicted RBP14.13□□□□□ -0.15
MSH6-210ENST00000540021 STAT3P40763 770 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 SLC18A3Q16572 532 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 LRRC37A3O60309 1634 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 NFAT5O94916 1531 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 KLRC4O43908 158 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 CDK8P49336 464 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 CCDC50Q8IVM0 306 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 PARP9Q8IXQ6 854 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 CEP95Q96GE4 821 aa14.13□□□□□ -0.15
MSH6-210ENST00000540021 ZNF233A6NK53 670 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 AFPP02771 609 aaKnown RBP14.12□□□□□ -0.15
MSH6-210ENST00000540021 CALRP27797 417 aaKnown RBP14.12□□□□□ -0.15
MSH6-210ENST00000540021 FUT2Q10981 343 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 MESDQ14696 234 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 MFSD14BQ5SR56 506 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 PSMD1Q99460 953 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 ANAPC4Q9UJX5 808 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 PNMA2Q9UL42 364 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 RGPD2P0DJD1 1756 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 FAM107AO95990 144 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 SNAP25P60880 206 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 CUL1Q13616 776 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 CDC37Q16543 378 aaPredicted RBP14.12□□□□□ -0.15
MSH6-210ENST00000540021 CAPN12Q6ZSI9 719 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 BRINP3Q76B58 766 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 TPH2Q8IWU9 490 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 NAP1L3Q99457 506 aaPredicted RBP14.12□□□□□ -0.15
MSH6-210ENST00000540021 BSDC1Q9NW68 430 aaPredicted RBP14.12□□□□□ -0.15
MSH6-210ENST00000540021 TBK1Q9UHD2 729 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 MYH8P13535 1937 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 NALCNQ8IZF0 1738 aa14.12□□□□□ -0.15
MSH6-210ENST00000540021 AFDNP55196 1824 aaKnown RBP14.12□□□□□ -0.15
MSH6-210ENST00000540021 USP17L15C9J2P7 530 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms