RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CTAGE1Q96RT6 745 aa20.28■□□□□ 0.84
DDX55-204ENST00000536079 HDAC6Q9UBN7 1215 aa20.28■□□□□ 0.84
DDX55-204ENST00000536079 DDX25Q9UHL0 483 aaKnown RBP20.28■□□□□ 0.84
DDX55-204ENST00000536079 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.28■□□□□ 0.84
DDX55-204ENST00000536079 CCNT1O60563 726 aaKnown RBP20.27■□□□□ 0.84
DDX55-204ENST00000536079 ATG7O95352 703 aa20.27■□□□□ 0.84
DDX55-204ENST00000536079 CLTBP09497 229 aa20.27■□□□□ 0.84
DDX55-204ENST00000536079 ZNF200P98182 395 aaPredicted RBP20.27■□□□□ 0.84
DDX55-204ENST00000536079 FAM47CQ5HY64 1035 aa20.27■□□□□ 0.84
DDX55-204ENST00000536079 GDF6Q6KF10 455 aaPredicted RBP20.27■□□□□ 0.84
DDX55-204ENST00000536079 FOXP1Q9H334 677 aaPredicted RBP20.27■□□□□ 0.84
DDX55-204ENST00000536079 PRDM5Q9NQX1 630 aaPredicted RBP20.27■□□□□ 0.84
DDX55-204ENST00000536079 NR2E3Q9Y5X4 410 aa20.27■□□□□ 0.84
DDX55-204ENST00000536079 H3BRB1 525 aa20.26■□□□□ 0.83
DDX55-204ENST00000536079 LGR5O75473 907 aa20.26■□□□□ 0.83
DDX55-204ENST00000536079 SAFBQ15424 915 aaKnown RBP eCLIP20.26■□□□□ 0.83
DDX55-204ENST00000536079 PPP4R3AQ6IN85 833 aa20.26■□□□□ 0.83
DDX55-204ENST00000536079 NFRKBQ6P4R8 1299 aa20.26■□□□□ 0.83
DDX55-204ENST00000536079 ABHD15Q6UXT9 468 aa20.26■□□□□ 0.83
DDX55-204ENST00000536079 POTEDQ86YR6 584 aa20.26■□□□□ 0.83
DDX55-204ENST00000536079 HAS1Q92839 578 aa20.26■□□□□ 0.83
DDX55-204ENST00000536079 RNPEPQ9H4A4 650 aa20.26■□□□□ 0.83
DDX55-204ENST00000536079 TUT1Q9H6E5 874 aaKnown RBP20.26■□□□□ 0.83
DDX55-204ENST00000536079 TBX21Q9UL17 535 aa20.26■□□□□ 0.83
DDX55-204ENST00000536079 DCDC2CA8MYV0 355 aa20.25■□□□□ 0.83
DDX55-204ENST00000536079 PSMD10O75832 226 aa20.25■□□□□ 0.83
DDX55-204ENST00000536079 CYP2C9P11712 490 aa20.25■□□□□ 0.83
DDX55-204ENST00000536079 ATP2B1P20020 1258 aa20.25■□□□□ 0.83
DDX55-204ENST00000536079 U2AF2P26368 475 aaKnown RBP eCLIP20.25■□□□□ 0.83
DDX55-204ENST00000536079 MARK3P27448 753 aa20.25■□□□□ 0.83
DDX55-204ENST00000536079 NBR1Q14596 966 aa20.25■□□□□ 0.83
DDX55-204ENST00000536079 UNC45AQ9H3U1 944 aa20.25■□□□□ 0.83
DDX55-204ENST00000536079 KCNMB3Q9NPA1 279 aa20.25■□□□□ 0.83
DDX55-204ENST00000536079 UMODL1Q5DID0 1318 aa20.25■□□□□ 0.83
DDX55-204ENST00000536079 IGKV6D-21A0A0A0MT36 114 aa20.24■□□□□ 0.83
DDX55-204ENST00000536079 KIAA0355O15063 1070 aa20.24■□□□□ 0.83
DDX55-204ENST00000536079 TOB1P50616 345 aaPredicted RBP20.24■□□□□ 0.83
DDX55-204ENST00000536079 LRCH2Q5VUJ6 765 aa20.24■□□□□ 0.83
DDX55-204ENST00000536079 LARP1BQ659C4 914 aaKnown RBP20.24■□□□□ 0.83
DDX55-204ENST00000536079 B3GNT9Q6UX72 402 aa20.24■□□□□ 0.83
DDX55-204ENST00000536079 SESTD1Q86VW0 696 aa20.24■□□□□ 0.83
DDX55-204ENST00000536079 NOSTRINQ8IVI9 506 aa20.24■□□□□ 0.83
DDX55-204ENST00000536079 TBC1D22BQ9NU19 505 aa20.24■□□□□ 0.83
DDX55-204ENST00000536079 TMEM39AQ9NV64 488 aa20.24■□□□□ 0.83
DDX55-204ENST00000536079 MROH7Q68CQ1 1323 aa20.24■□□□□ 0.83
DDX55-204ENST00000536079 CHMP2AO43633 222 aa20.23■□□□□ 0.83
DDX55-204ENST00000536079 SUPT20HL2P0C7V6 817 aa20.23■□□□□ 0.83
DDX55-204ENST00000536079 SMIM10L2AP0DMW4 78 aa20.23■□□□□ 0.83
DDX55-204ENST00000536079 SMIM10L2BP0DMW5 78 aa20.23■□□□□ 0.83
DDX55-204ENST00000536079 GCFC2P16383 781 aaKnown RBP20.23■□□□□ 0.83
DDX55-204ENST00000536079 MDM2Q00987 491 aaPredicted RBP20.23■□□□□ 0.83
DDX55-204ENST00000536079 CCDC60Q8IWA6 550 aaPredicted RBP20.23■□□□□ 0.83
DDX55-204ENST00000536079 C7orf31Q8N865 590 aa20.23■□□□□ 0.83
DDX55-204ENST00000536079 WNT8BQ93098 351 aa20.23■□□□□ 0.83
DDX55-204ENST00000536079 RIT2Q99578 217 aa20.23■□□□□ 0.83
DDX55-204ENST00000536079 KATNAL1Q9BW62 490 aa20.23■□□□□ 0.83
DDX55-204ENST00000536079 TMEM60Q9H2L4 133 aa20.23■□□□□ 0.83
DDX55-204ENST00000536079 GTF2IRD1Q9UHL9 959 aa20.23■□□□□ 0.83
DDX55-204ENST00000536079 VAV3Q9UKW4 847 aa20.23■□□□□ 0.83
DDX55-204ENST00000536079 GAS7O60861 476 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 ATP4AP20648 1035 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 HOXC8P31273 242 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 MAGEA10P43363 369 aaPredicted RBP20.22■□□□□ 0.83
DDX55-204ENST00000536079 PTPN11Q06124 597 aaPredicted RBP20.22■□□□□ 0.83
DDX55-204ENST00000536079 ZNF174Q15697 407 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 PRPF38BQ5VTL8 546 aaKnown RBP20.22■□□□□ 0.83
DDX55-204ENST00000536079 MCTP1Q6DN14 999 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 ZNF746Q6NUN9 644 aaPredicted RBP20.22■□□□□ 0.83
DDX55-204ENST00000536079 SWSAP1Q6NVH7 229 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 HSCBQ8IWL3 235 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 DHX38Q92620 1227 aaKnown RBP20.22■□□□□ 0.83
DDX55-204ENST00000536079 GLG1Q92896 1179 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 ZBTB10Q96DT7 871 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 INTS4Q96HW7 963 aaKnown RBP20.22■□□□□ 0.83
DDX55-204ENST00000536079 TEKT3Q9BXF9 490 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 KIF3AQ9Y496 699 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 EMSYQ7Z589 1322 aa20.22■□□□□ 0.83
DDX55-204ENST00000536079 EML1O00423 815 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 TLR3O15455 904 aaKnown RBP20.21■□□□□ 0.83
DDX55-204ENST00000536079 MCM7P33993 719 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 STAT5BP51692 787 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 KRT76Q01546 638 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 PTGISQ16647 500 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 UGCGQ16739 394 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 BADQ92934 168 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 MTMR9Q96QG7 549 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 SEZ6LQ9BYH1 1024 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 PPP1R12CQ9BZL4 782 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 SMARCAD1Q9H4L7 1026 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 SETD4Q9NVD3 440 aa20.21■□□□□ 0.83
DDX55-204ENST00000536079 H3BQV1 296 aa20.2■□□□□ 0.82
DDX55-204ENST00000536079 CYP2C18P33260 490 aa20.2■□□□□ 0.82
DDX55-204ENST00000536079 GNL2Q13823 731 aaKnown RBP20.2■□□□□ 0.82
DDX55-204ENST00000536079 PLCB4Q15147 1175 aa20.2■□□□□ 0.82
DDX55-204ENST00000536079 MIS18BP1Q6P0N0 1132 aa20.2■□□□□ 0.82
DDX55-204ENST00000536079 FAM20AQ96MK3 541 aa20.2■□□□□ 0.82
DDX55-204ENST00000536079 GDF15Q99988 308 aa20.2■□□□□ 0.82
DDX55-204ENST00000536079 NOC4LQ9BVI4 516 aaKnown RBP20.2■□□□□ 0.82
DDX55-204ENST00000536079 DISC1Q9NRI5 854 aa20.2■□□□□ 0.82
DDX55-204ENST00000536079 CEP290O15078 2479 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms