RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CYP26C1Q6V0L0 522 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 GPBP1Q86WP2 473 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 FAM114A1Q8IWE2 563 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 NIM1KQ8IY84 436 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 NAP1L4Q99733 375 aaKnown RBP12.77□□□□□ -0.36
USP35-207ENST00000530546 BMP2KQ9NSY1 1161 aaPredicted RBP12.77□□□□□ -0.36
USP35-207ENST00000530546 PANK4Q9NVE7 773 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 ZBTB21Q9ULJ3 1066 aa12.77□□□□□ -0.36
USP35-207ENST00000530546 FAM86B1E9PN63 330 aa12.77□□□□□ -0.37
USP35-207ENST00000530546 FAM86B2P0C5J1 330 aa12.77□□□□□ -0.37
USP35-207ENST00000530546 KCNA3P22001 575 aa12.77□□□□□ -0.37
USP35-207ENST00000530546 SATB1Q01826 763 aa12.77□□□□□ -0.37
USP35-207ENST00000530546 COASYQ13057 564 aa12.77□□□□□ -0.37
USP35-207ENST00000530546 SEMA3FQ13275 785 aa12.77□□□□□ -0.37
USP35-207ENST00000530546 AP3B2Q13367 1082 aa12.77□□□□□ -0.37
USP35-207ENST00000530546 NELFCDQ8IXH7 590 aa12.77□□□□□ -0.37
USP35-207ENST00000530546 PNKPQ96T60 521 aa12.77□□□□□ -0.37
USP35-207ENST00000530546 KCNMB3Q9NPA1 279 aa12.77□□□□□ -0.37
USP35-207ENST00000530546 A1CFQ9NQ94 594 aaKnown RBP12.77□□□□□ -0.37
USP35-207ENST00000530546 OPLAHO14841 1288 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 MNAT1P51948 309 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 TSR1Q2NL82 804 aaKnown RBP12.76□□□□□ -0.37
USP35-207ENST00000530546 ZNF569Q5MCW4 686 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 CENPPQ6IPU0 288 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 OR8K1Q8NGG5 319 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 GMLQ99445 158 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 FGFBP2Q9BYJ0 223 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 GLIS2Q9BZE0 524 aaPredicted RBP12.76□□□□□ -0.37
USP35-207ENST00000530546 LRRC27Q9C0I9 530 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 POLD4Q9HCU8 107 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 AGPAT5Q9NUQ2 364 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 PPP1R2P41236 205 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 CYP4A11Q02928 519 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 SPDYE2Q495Y8 402 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 DNAJC19Q96DA6 116 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 PSMD1Q99460 953 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 NT5C3AQ9H0P0 336 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 CNTNAP1P78357 1384 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 KDM3AQ9Y4C1 1321 aa12.76□□□□□ -0.37
USP35-207ENST00000530546 KIF5CO60282 957 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 SHOX2O60902 331 aaPredicted RBP12.75□□□□□ -0.37
USP35-207ENST00000530546 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 BAG6P46379 1132 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 HERC4Q5GLZ8 1057 aaPredicted RBP12.75□□□□□ -0.37
USP35-207ENST00000530546 FAM26FQ5R3K3 315 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 GUF1Q8N442 669 aaKnown RBP12.75□□□□□ -0.37
USP35-207ENST00000530546 FBXO28Q9NVF7 368 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 TFR2Q9UP52 801 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 COL4A5P29400 1685 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 A0A1W2PQC6 194 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 HNRNPH1P31943 449 aaKnown RBP12.75□□□□□ -0.37
USP35-207ENST00000530546 PSMC6P62333 389 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 SETQ01105 290 aaPredicted RBP12.75□□□□□ -0.37
USP35-207ENST00000530546 PABPC4Q13310 644 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP35-207ENST00000530546 MIIPQ5JXC2 388 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 FKBP15Q5T1M5 1219 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 SLFN12Q8IYM2 578 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 MYOCDQ8IZQ8 938 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 TMX2Q9Y320 296 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 CYP3A7-CYP3A51PA0A087WV96 503 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 ANKRD65E5RJM6 399 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 RNF40O75150 1001 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 CYP3A7P24462 503 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 CXCL9Q07325 125 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 WDR93Q6P2C0 686 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 BTNL9Q6UXG8 535 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 CATSPER3Q86XQ3 398 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 ETNPPLQ8TBG4 499 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 TANGO6Q9C0B7 1094 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 ZSWIM4Q9H7M6 989 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 CAPN11Q9UMQ6 739 aa12.75□□□□□ -0.37
USP35-207ENST00000530546 RASSF10A6NK89 507 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 MSH4O15457 936 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 SREBF1P36956 1147 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 CCDC65Q8IXS2 484 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 KAT2BQ92831 832 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 LENG9Q96B70 501 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 TSG101Q99816 390 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 FAM207AQ9NSI2 230 aaPredicted RBP12.74□□□□□ -0.37
USP35-207ENST00000530546 TRIM10Q9UDY6 481 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 EPN1Q9Y6I3 576 aaPredicted RBP12.74□□□□□ -0.37
USP35-207ENST00000530546 TRAF5O00463 557 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 CHMP2AO43633 222 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 FOSP01100 380 aaPredicted RBP12.74□□□□□ -0.37
USP35-207ENST00000530546 CRYGNQ8WXF5 182 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 MBOAT7Q96N66 472 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 MMRN2Q9H8L6 949 aa12.74□□□□□ -0.37
USP35-207ENST00000530546 ZNF646O15015 1829 aaPredicted RBP12.73□□□□□ -0.37
USP35-207ENST00000530546 EBAG9O00559 213 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 PRPF6O94906 941 aaKnown RBP12.73□□□□□ -0.37
USP35-207ENST00000530546 NDUFA10O95299 355 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 CYP11B2P19099 503 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 FECHP22830 423 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 VSNL1P62760 191 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 WHAMMP3Q1A5X7 153 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 VWA3BQ502W6 1294 aa12.73□□□□□ -0.37
USP35-207ENST00000530546 HAUS3Q68CZ6 603 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms