RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 NOD1Q9Y239 953 aa19.74■□□□□ 0.75
USP35-202ENST00000528910 SZT2Q5T011 3432 aa19.74■□□□□ 0.75
USP35-202ENST00000528910 LGR5O75473 907 aa19.73■□□□□ 0.75
USP35-202ENST00000528910 SMIM10L2AP0DMW4 78 aa19.73■□□□□ 0.75
USP35-202ENST00000528910 SMIM10L2BP0DMW5 78 aa19.73■□□□□ 0.75
USP35-202ENST00000528910 XBP1P17861 261 aa19.73■□□□□ 0.75
USP35-202ENST00000528910 HIC1Q14526 733 aa19.73■□□□□ 0.75
USP35-202ENST00000528910 RABEP1Q15276 862 aa19.73■□□□□ 0.75
USP35-202ENST00000528910 DHX38Q92620 1227 aaKnown RBP19.73■□□□□ 0.75
USP35-202ENST00000528910 SIP14410 1827 aa19.73■□□□□ 0.75
USP35-202ENST00000528910 TET1Q8NFU7 2136 aa19.72■□□□□ 0.75
USP35-202ENST00000528910 USP11P51784 963 aa19.72■□□□□ 0.75
USP35-202ENST00000528910 BFSP2Q13515 415 aa19.72■□□□□ 0.75
USP35-202ENST00000528910 UTP14CQ5TAP6 766 aaKnown RBP19.72■□□□□ 0.75
USP35-202ENST00000528910 PSRC1Q6PGN9 363 aaPredicted RBP19.72■□□□□ 0.75
USP35-202ENST00000528910 C16orf59Q7L2K0 433 aa19.72■□□□□ 0.75
USP35-202ENST00000528910 CCDC155Q8N6L0 562 aa19.72■□□□□ 0.75
USP35-202ENST00000528910 IL27Q8NEV9 243 aa19.72■□□□□ 0.75
USP35-202ENST00000528910 GBF1Q92538 1859 aa19.72■□□□□ 0.75
USP35-202ENST00000528910 VWCEQ96DN2 955 aa19.72■□□□□ 0.75
USP35-202ENST00000528910 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.72■□□□□ 0.75
USP35-202ENST00000528910 UPF2Q9HAU5 1272 aaKnown RBP19.72■□□□□ 0.75
USP35-202ENST00000528910 IL23AQ9NPF7 189 aa19.72■□□□□ 0.75
USP35-202ENST00000528910 KCNJ14Q9UNX9 436 aa19.72■□□□□ 0.75
USP35-202ENST00000528910 IPO5O00410 1097 aaKnown RBP19.71■□□□□ 0.75
USP35-202ENST00000528910 DHX15O43143 795 aaKnown RBP19.71■□□□□ 0.75
USP35-202ENST00000528910 DTNBO60941 627 aa19.71■□□□□ 0.75
USP35-202ENST00000528910 CCL23P55773 120 aa19.71■□□□□ 0.75
USP35-202ENST00000528910 ACTR2P61160 394 aa19.71■□□□□ 0.75
USP35-202ENST00000528910 PTK7Q13308 1070 aa19.71■□□□□ 0.75
USP35-202ENST00000528910 TRIM71Q2Q1W2 868 aaKnown RBP19.71■□□□□ 0.75
USP35-202ENST00000528910 RASIP1Q5U651 963 aa19.71■□□□□ 0.75
USP35-202ENST00000528910 MOXD1Q6UVY6 613 aa19.71■□□□□ 0.75
USP35-202ENST00000528910 KRT25Q7Z3Z0 450 aa19.71■□□□□ 0.75
USP35-202ENST00000528910 TBCKQ8TEA7 893 aa19.71■□□□□ 0.75
USP35-202ENST00000528910 AFAP1L1Q8TED9 768 aa19.71■□□□□ 0.75
USP35-202ENST00000528910 PCYT2Q99447 389 aa19.71■□□□□ 0.75
USP35-202ENST00000528910 SH2B1Q9NRF2 756 aaPredicted RBP19.71■□□□□ 0.75
USP35-202ENST00000528910 C17orf102A2RUQ5 167 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 JAK2O60674 1132 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 ATG7O95352 703 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 CCNE2O96020 404 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 PFKMP08237 780 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 RFC2P35250 354 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 NONOQ15233 471 aaKnown RBP eCLIP19.7■□□□□ 0.74
USP35-202ENST00000528910 PRR16Q569H4 304 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 TMEM240Q5SV17 173 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 GPR153Q6NV75 609 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 SERINC5Q86VE9 423 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 SCLYQ96I15 445 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 LRCH3Q96II8 777 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 RNPC3Q96LT9 517 aaKnown RBP19.7■□□□□ 0.74
USP35-202ENST00000528910 ZSCAN31Q96LW9 406 aaPredicted RBP19.7■□□□□ 0.74
USP35-202ENST00000528910 MBOAT7Q96N66 472 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 TBC1D32Q96NH3 1257 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 SMARCAD1Q9H4L7 1026 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 GJB4Q9NTQ9 266 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 ERAP1Q9NZ08 941 aa19.7■□□□□ 0.74
USP35-202ENST00000528910 PTPRSQ13332 1948 aa19.69■□□□□ 0.74
USP35-202ENST00000528910 CYP3A7-CYP3A51PA0A087WV96 503 aa19.69■□□□□ 0.74
USP35-202ENST00000528910 IGKV6D-21A0A0A0MT36 114 aa19.69■□□□□ 0.74
USP35-202ENST00000528910 IQCF3P0C7M6 154 aa19.69■□□□□ 0.74
USP35-202ENST00000528910 CYP3A7P24462 503 aa19.69■□□□□ 0.74
USP35-202ENST00000528910 ADAM17P78536 824 aa19.69■□□□□ 0.74
USP35-202ENST00000528910 ZNF200P98182 395 aaPredicted RBP19.69■□□□□ 0.74
USP35-202ENST00000528910 LMBR1Q8WVP7 490 aa19.69■□□□□ 0.74
USP35-202ENST00000528910 WNT8BQ93098 351 aa19.69■□□□□ 0.74
USP35-202ENST00000528910 LLPHQ9BRT6 129 aaKnown RBP19.69■□□□□ 0.74
USP35-202ENST00000528910 ZNF577Q9BSK1 485 aa19.69■□□□□ 0.74
USP35-202ENST00000528910 RNPEPQ9H4A4 650 aa19.69■□□□□ 0.74
USP35-202ENST00000528910 TBC1D22BQ9NU19 505 aa19.69■□□□□ 0.74
USP35-202ENST00000528910 ACRP10323 421 aa19.68■□□□□ 0.74
USP35-202ENST00000528910 Q4G0T1 1027 aa19.68■□□□□ 0.74
USP35-202ENST00000528910 LRRC8DQ7L1W4 858 aa19.68■□□□□ 0.74
USP35-202ENST00000528910 CCDC83Q8IWF9 413 aa19.68■□□□□ 0.74
USP35-202ENST00000528910 RETREG2Q8NC44 543 aa19.68■□□□□ 0.74
USP35-202ENST00000528910 TNFRSF25Q93038 417 aa19.68■□□□□ 0.74
USP35-202ENST00000528910 NRCAMQ92823 1304 aa19.68■□□□□ 0.74
USP35-202ENST00000528910 DDX39AO00148 427 aaKnown RBP19.67■□□□□ 0.74
USP35-202ENST00000528910 MSH4O15457 936 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 TDP2O95551 362 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 GNAT1P11488 350 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 CKBP12277 381 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 SELPP16109 830 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 KRT76Q01546 638 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 ZNF746Q6NUN9 644 aaPredicted RBP19.67■□□□□ 0.74
USP35-202ENST00000528910 TRAF7Q6Q0C0 670 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 ABHD15Q6UXT9 468 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 ZNF365Q70YC5 407 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 PLPPR4Q7Z2D5 763 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 RPUSD2Q8IZ73 545 aaKnown RBP19.67■□□□□ 0.74
USP35-202ENST00000528910 OXER1Q8TDS5 423 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 HERVK_113Q902F9 699 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 GLG1Q92896 1179 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 ATP6V0A1Q93050 837 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 AZI2Q9H6S1 392 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 MICAL3Q7RTP6 2002 aa19.67■□□□□ 0.74
USP35-202ENST00000528910 CCDC194A0A1B0GVG4 234 aa19.66■□□□□ 0.74
USP35-202ENST00000528910 TREHO43280 583 aa19.66■□□□□ 0.74
USP35-202ENST00000528910 ST18O60284 1047 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms