RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 RNFT1Q5M7Z0 435 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 FKBP15Q5T1M5 1219 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 IZUMO3Q5VZ72 239 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 NPNTQ6UXI9 565 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 C12orf40Q86WS4 652 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 SLC30A5Q8TAD4 765 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 ARL8AQ96BM9 186 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 C1GALT1C1Q96EU7 318 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 MVB12AQ96EY5 273 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 RSRC1Q96IZ7 334 aaKnown RBP4.72□□□□□ -1.65
SKP1-209ENST00000522552 CDHR1Q96JP9 859 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 SLC30A3Q99726 388 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 NUDT16L1Q9BRJ7 211 aaKnown RBP4.72□□□□□ -1.65
SKP1-209ENST00000522552 COL25A1Q9BXS0 654 aaPredicted RBP4.72□□□□□ -1.65
SKP1-209ENST00000522552 MS4A5Q9H3V2 200 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 CCDC86Q9H6F5 360 aaKnown RBP4.72□□□□□ -1.65
SKP1-209ENST00000522552 PLEKHA5Q9HAU0 1116 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 HELLSQ9NRZ9 838 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 GGA3Q9NZ52 723 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 TJP2Q9UDY2 1190 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 SERPINB13Q9UIV8 391 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 TMEM98Q9Y2Y6 226 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 PCDHA11Q9Y5I1 949 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 ANKRD18BA2A2Z9 1011 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 SYNDIG1LA6NDD5 238 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 B4E171 279 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 GHRHP01286 108 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 CSTBP04080 98 aaKnown RBP4.71□□□□□ -1.66
SKP1-209ENST00000522552 THBS1P07996 1170 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 SRGAP2CP0DJJ0 459 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 ZBTB48P10074 688 aaPredicted RBP4.71□□□□□ -1.66
SKP1-209ENST00000522552 VEGFAP15692 232 aaPredicted RBP4.71□□□□□ -1.66
SKP1-209ENST00000522552 GRK2P25098 689 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 GBP1P32455 592 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 ELF1P32519 619 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 GALNSP34059 522 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 GRM1Q13255 1194 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 KIF22Q14807 665 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 FAM209BQ5JX69 171 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 ITPRIPL1Q6GPH6 555 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 SWSAP1Q6NVH7 229 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 TXNDC11Q6PKC3 985 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 USP45Q70EL2 814 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 MAP4K3Q8IVH8 894 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 NDUFAF2Q8N183 169 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 KCT2Q8NC54 265 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 FRS2Q8WU20 508 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 TGFBRAP1Q8WUH2 860 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 HVCN1Q96D96 273 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 CCDC74BQ96LY2 380 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 CHCHD6Q9BRQ6 235 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 LRFN3Q9BTN0 628 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 SEZ6LQ9BYH1 1024 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 WNT10AQ9GZT5 417 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 MKRN2Q9H000 416 aaKnown RBP4.71□□□□□ -1.66
SKP1-209ENST00000522552 ADAM19Q9H013 955 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 NUCKS1Q9H1E3 243 aaKnown RBP4.71□□□□□ -1.66
SKP1-209ENST00000522552 TRIT1Q9H3H1 467 aaKnown RBP4.71□□□□□ -1.66
SKP1-209ENST00000522552 ATP6V0A4Q9HBG4 840 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 GP6Q9HCN6 339 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 KRT82Q9NSB4 513 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 CCDC39Q9UFE4 941 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 HCN2Q9UL51 889 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 CEP131Q9UPN4 1083 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 CSADQ9Y600 493 aa4.71□□□□□ -1.66
SKP1-209ENST00000522552 RHPN2P1A8MT19 583 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 SOX1O00570 391 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 ATXN7O15265 892 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 ZNF862O60290 1169 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 SLITRK5O94991 958 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 DDX58O95786 925 aaKnown RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 ITGA4P13612 1032 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 MAPK10P53779 464 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 PDCD1Q15116 288 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 CNN3Q15417 329 aaKnown RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 TAF12Q16514 161 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 CCDC30Q5VVM6 783 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 KIAA1614Q5VZ46 1190 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 LMBRD2Q68DH5 695 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 OVCH1Q7RTY7 1134 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 TMTC1Q8IUR5 882 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 COLGALT2Q8IYK4 626 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 C7orf61Q8IZ16 206 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 ESX1Q8N693 406 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 BAHD1Q8TBE0 780 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 ATRIPQ8WXE1 791 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 NANOS1Q8WY41 292 aaKnown RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 ZNF496Q96IT1 587 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 ZSCAN31Q96LW9 406 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 ZMAT2Q96NC0 199 aaKnown RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 RMDN3Q96TC7 470 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 PHF20Q9BVI0 1012 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 TMEM120AQ9BXJ8 343 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.7□□□□□ -1.66
SKP1-209ENST00000522552 UBN1Q9NPG3 1134 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 SH2B1Q9NRF2 756 aaPredicted RBP4.7□□□□□ -1.66
SKP1-209ENST00000522552 MRGBPQ9NV56 204 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 NKIRAS2Q9NYR9 191 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 GRHPRQ9UBQ7 328 aa4.7□□□□□ -1.66
SKP1-209ENST00000522552 CORO2BQ9UQ03 480 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms