RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TMEM47Q9BQJ4 181 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 PCDHA6Q9UN73 950 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 PCDHA8Q9Y5H6 950 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 TNFAIP2Q03169 654 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 ISCA1Q9BUE6 129 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 RAVER2Q9HCJ3 691 aaKnown RBP17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 PLCG1P19174 1290 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 PHKA2P46019 1235 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 ATP6V0A4Q9HBG4 840 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 LMCD1Q9NZU5 365 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 MAPK6Q16659 721 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 TTBK2Q6IQ55 1244 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 SCYL1Q96KG9 808 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 VCXQ9H320 206 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 DONSONQ9NYP3 566 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 HEXIM1O94992 359 aaKnown RBP17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 ARHGAP4P98171 946 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 CTTNQ14247 550 aaKnown RBP17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 LMNTD2Q8IXW0 634 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 OTUD5Q96G74 571 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 PPP1R16BQ96T49 567 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 RCOR1Q9UKL0 485 aa17.61■□□□□ 0.41
PCDHA3-201ENST00000522353 S100BP04271 92 aaPredicted RBP17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 DDIT3P35638 169 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 PSMD6Q15008 389 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 OR6B2Q6IFH4 312 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 CCNYQ8ND76 341 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 IKBKBO14920 756 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 LRRN2O75325 713 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 CIITAP33076 1130 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 RASSF2P50749 326 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 GCNT4Q9P109 453 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 KCNQ2O43526 872 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 TRIM28Q13263 835 aaKnown RBP17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 THEM5Q8N1Q8 247 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 NEK9Q8TD19 979 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 NUF2Q9BZD4 464 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 SLITRK6Q9H5Y7 841 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 KIAA1586Q9HCI6 787 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 FCER1AP12319 257 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 OAS2P29728 719 aaKnown RBP17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 LRRC63Q05C16 580 aa17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 DCP1AQ9NPI6 582 aaPredicted RBP17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.6■□□□□ 0.41
PCDHA3-201ENST00000522353 F8W8V4 182 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 ARL13BQ3SXY8 428 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 FAM20AQ96MK3 541 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 ZNRF3Q9ULT6 936 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 CSPG5O95196 566 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 RCAN1P53805 252 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 PEX3P56589 373 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 ZNF667Q5HYK9 610 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 ACAD9Q9H845 621 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 TET3O43151 1660 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 CPDO75976 1380 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 IGSF3O75054 1194 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 SFNP31947 248 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 PCK1P35558 622 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 SNAP25P60880 206 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 YWHAGP61981 247 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 RASSF7Q02833 373 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 EHHADHQ08426 723 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 TSNAXIP1Q2TAA8 658 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 HEXIM2Q96MH2 286 aaKnown RBP17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 MCF2LO15068 1137 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 WDR46O15213 610 aaKnown RBP17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 PTPROQ16827 1216 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 EPHA10Q5JZY3 1008 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 C1orf228Q6PIY5 440 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 LRRC8AQ8IWT6 810 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 CCDC13Q8IYE1 715 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 ANKRD13CQ8N6S4 541 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 ANKRD42Q8N9B4 389 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 TRIM56Q9BRZ2 755 aaKnown RBP17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 DPH5Q9H2P9 285 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 DNAJC5Q9H3Z4 198 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 UBE2TQ9NPD8 197 aaPredicted RBP17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 RWDD2AQ9UIY3 292 aa17.59■□□□□ 0.41
PCDHA3-201ENST00000522353 CYP2D6P10635 497 aa17.58■□□□□ 0.41
PCDHA3-201ENST00000522353 CASP14P31944 242 aa17.58■□□□□ 0.41
PCDHA3-201ENST00000522353 CRAMP1Q96RY5 1269 aa17.58■□□□□ 0.41
PCDHA3-201ENST00000522353 EFCAB8A8MWE9 144 aa17.58■□□□□ 0.41
PCDHA3-201ENST00000522353 CDC25AP30304 524 aa17.58■□□□□ 0.41
PCDHA3-201ENST00000522353 ECE1P42892 770 aa17.58■□□□□ 0.41
PCDHA3-201ENST00000522353 TWF2Q6IBS0 349 aaKnown RBP17.58■□□□□ 0.41
PCDHA3-201ENST00000522353 PSPC1Q8WXF1 523 aaKnown RBP17.58■□□□□ 0.41
PCDHA3-201ENST00000522353 PLEKHA8P1O95397 391 aa17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 GUCY2FP51841 1108 aa17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 PRELPP51888 382 aa17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 TSTA3Q13630 321 aaPredicted RBP17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 NECTIN1Q15223 517 aa17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 THNSL1Q8IYQ7 743 aa17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 CHD1O14646 1710 aa17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 SGK1O00141 431 aa17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 CLDN3O15551 220 aa17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 PRPSAP2O60256 369 aa17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 CD58P19256 250 aa17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 PDE1BQ01064 536 aa17.58■□□□□ 0.4
PCDHA3-201ENST00000522353 ADAT2Q7Z6V5 191 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms