RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 BARX2Q9UMQ3 279 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-217ENST00000522117 PCDHA13Q9Y5I0 950 aa13.12□□□□□ -0.31
SPIDR-217ENST00000522117 PIK3C2AO00443 1686 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 MRC1P22897 1456 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-217ENST00000522117 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-217ENST00000522117 CCNB1P14635 433 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 CDK17Q00537 523 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 DIXDC1Q155Q3 683 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 ZC2HC1CQ53FD0 456 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-217ENST00000522117 ZNF394Q53GI3 561 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 CLEC4GQ6UXB4 293 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 CEP128Q6ZU80 1094 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 RETREG2Q8NC44 543 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 RBBP8NLQ8NC74 664 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-217ENST00000522117 SUPT20HQ8NEM7 779 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 PIGOQ8TEQ8 1089 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 TEKT1Q969V4 418 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 GBP5Q96PP8 586 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 GSDMAQ96QA5 445 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 OXCT2Q9BYC2 517 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-217ENST00000522117 NACA2Q9H009 215 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 PLEKP08567 350 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-217ENST00000522117 MMP13P45452 471 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 NLRP5P59047 1200 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 RNASELQ05823 741 aaKnown RBP13.11□□□□□ -0.31
SPIDR-217ENST00000522117 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 MIGA2Q7L4E1 593 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 DDX42Q86XP3 938 aaKnown RBP eCLIP13.11□□□□□ -0.31
SPIDR-217ENST00000522117 SPATA16Q9BXB7 569 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 RETREG1Q9H6L5 497 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 VPS54Q9P1Q0 977 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 LRCH1Q9Y2L9 728 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 USP15Q9Y4E8 981 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-217ENST00000522117 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
SPIDR-217ENST00000522117 SH3BP5O60239 455 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 KCNA3P22001 575 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 PSMC1P62191 440 aaKnown RBP13.1□□□□□ -0.31
SPIDR-217ENST00000522117 CTDSPL2Q05D32 466 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 GIGYF2Q6Y7W6 1299 aaKnown RBP13.1□□□□□ -0.31
SPIDR-217ENST00000522117 NCCRP1Q6ZVX7 275 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-217ENST00000522117 FITM2Q8N6M3 262 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 GATA6Q92908 595 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 FERMT2Q96AC1 680 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 PRMT1Q99873 361 aaKnown RBP13.1□□□□□ -0.31
SPIDR-217ENST00000522117 IFIH1Q9BYX4 1025 aaKnown RBP13.1□□□□□ -0.31
SPIDR-217ENST00000522117 CSRNP2Q9H175 543 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 ZNHIT6Q9NWK9 470 aaKnown RBP13.1□□□□□ -0.31
SPIDR-217ENST00000522117 CTTNBP2NLQ9P2B4 639 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 MYH10P35580 1976 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 MYH1P12882 1939 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 hCG_2014768A0A024R1R8 64 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 F8VZ95 297 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 TIMM44O43615 452 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 HSPD1P10809 573 aaKnown RBP13.1□□□□□ -0.31
SPIDR-217ENST00000522117 CCNFP41002 786 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 RASSF7Q02833 373 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 MTMR3Q13615 1198 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 CUL1Q13616 776 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 SPA17Q15506 151 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 P3H1Q32P28 736 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 ZNF365Q70YC5 407 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 ANKRD13AQ8IZ07 590 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 ARHGAP18Q8N392 663 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 KAZALD1Q96I82 304 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 ETNK2Q9NVF9 386 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 NMRK1Q9NWW6 199 aa13.1□□□□□ -0.31
SPIDR-217ENST00000522117 SRPRBQ9Y5M8 271 aaKnown RBP13.1□□□□□ -0.31
SPIDR-217ENST00000522117 USP31Q70CQ4 1352 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 ECM29Q5VYK3 1845 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-217ENST00000522117 ZPR1O75312 459 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 TJP3O95049 919 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 KLK7P49862 253 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 ANTXR2P58335 489 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 NLRP6P59044 892 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 TMED1Q13445 227 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 RCN2Q14257 317 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 SLC4A8Q2Y0W8 1093 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 KBTBD12Q3ZCT8 623 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 DUS1LQ6P1R4 473 aaKnown RBP13.09□□□□□ -0.31
SPIDR-217ENST00000522117 SLF2Q8IX21 1173 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 SLC15A3Q8IY34 581 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 TRIM11Q96F44 468 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 FAM81BQ96LP2 452 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 RAB3IPQ96QF0 476 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-217ENST00000522117 NUDCD1Q96RS6 583 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 RMND1Q9NWS8 449 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
SPIDR-217ENST00000522117 DDX60Q8IY21 1712 aaKnown RBP13.09□□□□□ -0.31
SPIDR-217ENST00000522117 GRID2IPA4D2P6 1211 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 RASA1P20936 1047 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 RXRBP28702 533 aa13.09□□□□□ -0.31
SPIDR-217ENST00000522117 DHX9Q08211 1270 aaKnown RBP13.09□□□□□ -0.31
SPIDR-217ENST00000522117 PAK1Q13153 545 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms