RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 USP17L6PQ6QN14 398 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 SV2BQ7L1I2 683 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 TRAPPC11Q7Z392 1133 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 OR8K1Q8NGG5 319 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 CDK5RAP3Q96JB5 506 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 PNKPQ96T60 521 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 EPC1Q9H2F5 836 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 RANBP17Q9H2T7 1088 aaKnown RBP20.27■□□□□ 0.84
SDC2-202ENST00000518385 ZCCHC17Q9NP64 241 aaKnown RBP20.27■□□□□ 0.84
SDC2-202ENST00000518385 PUF60Q9UHX1 559 aaKnown RBP20.27■□□□□ 0.84
SDC2-202ENST00000518385 PCDHA12Q9UN75 941 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 EPN1Q9Y6I3 576 aaPredicted RBP20.27■□□□□ 0.84
SDC2-202ENST00000518385 ZHX2Q9Y6X8 837 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 KDM3AQ9Y4C1 1321 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 MYH7BA7E2Y1 1941 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 KLRC4O43908 158 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 CYP3A4P08684 503 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 CIITAP33076 1130 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 SREBF1P36956 1147 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 IREB2P48200 963 aaKnown RBP20.26■□□□□ 0.83
SDC2-202ENST00000518385 BACE1P56817 501 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 ITIH3Q06033 890 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 Q4G0T1 1027 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 HYIQ5T013 277 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 PAPD7Q5XG87 772 aaKnown RBP20.26■□□□□ 0.83
SDC2-202ENST00000518385 GIMAP8Q8ND71 665 aaPredicted RBP20.26■□□□□ 0.83
SDC2-202ENST00000518385 HAS1Q92839 578 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 DNAJC7Q99615 494 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 TRIM9Q9C026 710 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 NT5C3AQ9H0P0 336 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 THAP9Q9H5L6 903 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 KCNMB3Q9NPA1 279 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 EMILIN3Q9NT22 766 aa20.26■□□□□ 0.83
SDC2-202ENST00000518385 ZNHIT6Q9NWK9 470 aaKnown RBP20.26■□□□□ 0.83
SDC2-202ENST00000518385 PVALEFA0A1B0GWK0 134 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 C19orf81C9J6K1 198 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 WDR46O15213 610 aaKnown RBP20.25■□□□□ 0.83
SDC2-202ENST00000518385 POTEIP0CG38 1075 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 POTEJP0CG39 1038 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 FXR1P51114 621 aaKnown RBP eCLIP20.25■□□□□ 0.83
SDC2-202ENST00000518385 ARHGAP4P98171 946 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 GRB10Q13322 594 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 MTMR2Q13614 643 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 VGLL4Q14135 290 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 MCM6Q14566 821 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 CCDC170Q8IYT3 715 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 ADSSL1Q8N142 457 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 DHTKD1Q96HY7 919 aaPredicted RBP20.25■□□□□ 0.83
SDC2-202ENST00000518385 PNMA2Q9UL42 364 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 CTNND2Q9UQB3 1225 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 MRPL11Q9Y3B7 192 aaKnown RBP20.25■□□□□ 0.83
SDC2-202ENST00000518385 RRP15Q9Y3B9 282 aaKnown RBP20.25■□□□□ 0.83
SDC2-202ENST00000518385 SNCAIPQ9Y6H5 919 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 KCNJ18B7U540 433 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 NDUFA10O95299 355 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 CYLC1P35663 651 aaPredicted RBP20.25■□□□□ 0.83
SDC2-202ENST00000518385 ERVK-24P63145 666 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 CDK17Q00537 523 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 KCNJ12Q14500 433 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 TMEM119Q4V9L6 283 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 HSP90AA4PQ58FG1 418 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 KLHL10Q6JEL2 608 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 KCTD17Q8N5Z5 321 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 TSGA10Q9BZW7 698 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 EHMT1Q9H9B1 1298 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 AFG3L2Q9Y4W6 797 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 CSADQ9Y600 493 aa20.25■□□□□ 0.83
SDC2-202ENST00000518385 PHIPQ8WWQ0 1821 aa20.24■□□□□ 0.83
SDC2-202ENST00000518385 KRT86O43790 486 aa20.24■□□□□ 0.83
SDC2-202ENST00000518385 KRT9P35527 623 aa20.24■□□□□ 0.83
SDC2-202ENST00000518385 VSNL1P62760 191 aa20.24■□□□□ 0.83
SDC2-202ENST00000518385 SNX29Q8TEQ0 813 aa20.24■□□□□ 0.83
SDC2-202ENST00000518385 NELFBQ8WX92 580 aa20.24■□□□□ 0.83
SDC2-202ENST00000518385 FAM20AQ96MK3 541 aa20.24■□□□□ 0.83
SDC2-202ENST00000518385 CAPN11Q9UMQ6 739 aa20.24■□□□□ 0.83
SDC2-202ENST00000518385 ABCB11O95342 1321 aa20.24■□□□□ 0.83
SDC2-202ENST00000518385 LGALS16A8MUM7 142 aa20.23■□□□□ 0.83
SDC2-202ENST00000518385 PSMA7O14818 248 aa20.23■□□□□ 0.83
SDC2-202ENST00000518385 IPO7O95373 1038 aaKnown RBP20.23■□□□□ 0.83
SDC2-202ENST00000518385 MAGEA9P43362 315 aa20.23■□□□□ 0.83
SDC2-202ENST00000518385 USH1GQ495M9 461 aa20.23■□□□□ 0.83
SDC2-202ENST00000518385 MAP1SQ66K74 1059 aaPredicted RBP20.23■□□□□ 0.83
SDC2-202ENST00000518385 CPLX3Q8WVH0 158 aa20.23■□□□□ 0.83
SDC2-202ENST00000518385 LARP4BQ92615 738 aaKnown RBP20.23■□□□□ 0.83
SDC2-202ENST00000518385 RAD54LQ92698 747 aa20.23■□□□□ 0.83
SDC2-202ENST00000518385 C12orf42Q96LP6 360 aa20.23■□□□□ 0.83
SDC2-202ENST00000518385 PNMA5Q96PV4 448 aa20.23■□□□□ 0.83
SDC2-202ENST00000518385 IRX2Q9BZI1 471 aaPredicted RBP20.23■□□□□ 0.83
SDC2-202ENST00000518385 EXOC1Q9NV70 894 aa20.23■□□□□ 0.83
SDC2-202ENST00000518385 LUC7L2Q9Y383 392 aaKnown RBP20.23■□□□□ 0.83
SDC2-202ENST00000518385 PAPPA2Q9BXP8 1791 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 A0A0U1RQG5 324 aaPredicted RBP20.22■□□□□ 0.83
SDC2-202ENST00000518385 PRCPP42785 496 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 DNM2P50570 870 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 PSMD2Q13200 908 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 MEA1Q16626 185 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 FIGNQ5HY92 759 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 ARMC9Q7Z3E5 817 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 FAM114A1Q8IWE2 563 aa20.22■□□□□ 0.83
SDC2-202ENST00000518385 ANKRD13AQ8IZ07 590 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms