RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 TTC14Q96N46 770 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 TMEM47Q9BQJ4 181 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 C16orf70Q9BSU1 422 aa11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 TUT1Q9H6E5 874 aaKnown RBP11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 RIF1Q5UIP0 2472 aaKnown RBP11.51□□□□□ -0.57
SH2D4A-202ENST00000518040 MYO15AQ9UKN7 3530 aa11.5□□□□□ -0.57
SH2D4A-202ENST00000518040 NR3C2P08235 984 aa11.5□□□□□ -0.57
SH2D4A-202ENST00000518040 CTSHP09668 335 aa11.5□□□□□ -0.57
SH2D4A-202ENST00000518040 FGRP09769 529 aa11.5□□□□□ -0.57
SH2D4A-202ENST00000518040 SRGAP2BP0DMP2 458 aa11.5□□□□□ -0.57
SH2D4A-202ENST00000518040 CAMK1Q14012 370 aa11.5□□□□□ -0.57
SH2D4A-202ENST00000518040 CELF3Q5SZQ8 465 aaKnown RBP11.5□□□□□ -0.57
SH2D4A-202ENST00000518040 SUSD6Q92537 303 aa11.5□□□□□ -0.57
SH2D4A-202ENST00000518040 CDCA3Q99618 268 aaPredicted RBP11.5□□□□□ -0.57
SH2D4A-202ENST00000518040 DDX19BQ9UMR2 479 aa11.5□□□□□ -0.57
SH2D4A-202ENST00000518040 TREHO43280 583 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 SMIM10L2AP0DMW4 78 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 SMIM10L2BP0DMW5 78 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 SNHG28P0DPA3 235 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 HSPD1P10809 573 aaKnown RBP11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 NRIP1P48552 1158 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 CTDSPL2Q05D32 466 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 HSDL1Q3SXM5 330 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 CMTR2Q8IYT2 770 aaKnown RBP11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 ADSSL1Q8N142 457 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 SPPL3Q8TCT6 385 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 USP26Q9BXU7 913 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 RNPEPQ9H4A4 650 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 MAP3K20Q9NYL2 800 aaKnown RBP11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 MRPL11Q9Y3B7 192 aaKnown RBP11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 CCDC171Q6TFL3 1326 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 DGKIO75912 1065 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 GGPS1O95749 300 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 PANK1Q8TE04 598 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 NEK1Q96PY6 1258 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 TLE6Q9H808 572 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 MLXIPQ9HAP2 919 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 PXMP2Q9NR77 195 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 COL20A1Q9P218 1284 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 BARX2Q9UMQ3 279 aaPredicted RBP11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 NR2E1Q9Y466 385 aa11.49□□□□□ -0.57
SH2D4A-202ENST00000518040 MYH7BA7E2Y1 1941 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 ENPP3O14638 875 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 GLP2RO95838 553 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 ITGB1P05556 798 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 EIF2AK2P19525 551 aaKnown RBP11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 UBE3AQ05086 875 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 MTMR3Q13615 1198 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 ZMYM1Q5SVZ6 1142 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 ADGRD2Q7Z7M1 963 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 RSPH3Q86UC2 560 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 POF1BQ8WVV4 589 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 TOMM22Q9NS69 142 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 SORCS3Q9UPU3 1222 aa11.48□□□□□ -0.57
SH2D4A-202ENST00000518040 DCHS1Q96JQ0 3298 aa11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 CSPG5O95196 566 aa11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 LGALS2P05162 132 aa11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 RPLP2P05387 115 aaKnown RBP11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 CDC37Q16543 378 aaPredicted RBP11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 PDE12Q6L8Q7 609 aaKnown RBP11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 TAF2Q6P1X5 1199 aa11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 FAM43BQ6ZT52 329 aaPredicted RBP11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 SAMD3Q8N6K7 520 aa11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 KLHL23Q8NBE8 558 aa11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 ATP8B4Q8TF62 1192 aa11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 TBC1D5Q92609 795 aa11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 SEC62Q99442 399 aaKnown RBP11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 EHMT1Q9H9B1 1298 aa11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 ZNF215Q9UL58 517 aaPredicted RBP11.47□□□□□ -0.57
SH2D4A-202ENST00000518040 NOP56O00567 594 aaKnown RBP11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 SNPHO15079 494 aa11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 STAG3L1P0CL83 205 aa11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 PCP11498 1178 aaKnown RBP11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 DNAJB1P25685 340 aa11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 CLCN5P51795 746 aa11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 TMEM184AQ6ZMB5 413 aa11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 FRMD5Q7Z6J6 570 aa11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 RBM23Q86U06 439 aaKnown RBP11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 MICAL1Q8TDZ2 1067 aa11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 FTHL17Q9BXU8 183 aa11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 OSBPL7Q9BZF2 842 aa11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 SEMA4AQ9H3S1 761 aa11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 MRPL42Q9Y6G3 142 aaKnown RBP11.46□□□□□ -0.57
SH2D4A-202ENST00000518040 PDGFBP01127 241 aaPredicted RBP11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 GHRP10912 638 aa11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 HOXB8P17481 243 aaPredicted RBP11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 UBA1P22314 1058 aaKnown RBP11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 NT5C2P49902 561 aa11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 GHRHRQ02643 423 aa11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 ALX1Q15699 326 aa11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 RRP12Q5JTH9 1297 aaKnown RBP11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 DGLUCYQ7Z3D6 616 aa11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 NPAS4Q8IUM7 802 aa11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 TMEM105Q8N8V8 129 aa11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 KREMEN2Q8NCW0 462 aa11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 PDCD2LQ9BRP1 358 aa11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 AAASQ9NRG9 546 aa11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 SETD4Q9NVD3 440 aa11.46□□□□□ -0.58
SH2D4A-202ENST00000518040 NRCAMQ92823 1304 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms