RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 MIR1-1HGQ9H1L0 117 aa7.16□□□□□ -1.26
CHD1-208ENST00000512392 COMMD8Q9NX08 183 aa7.16□□□□□ -1.26
CHD1-208ENST00000512392 HERC5Q9UII4 1024 aaKnown RBP7.16□□□□□ -1.26
CHD1-208ENST00000512392 IPO8O15397 1037 aaKnown RBP7.15□□□□□ -1.26
CHD1-208ENST00000512392 HTATSF1O43719 755 aaKnown RBP7.15□□□□□ -1.26
CHD1-208ENST00000512392 FKBP9O95302 570 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 EOMESO95936 686 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 SLC3A2P08195 630 aaKnown RBP7.15□□□□□ -1.26
CHD1-208ENST00000512392 DHRS4L1P0CG22 281 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 SEPHS1P49903 392 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 RCAN1P53805 252 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 RPS26P62854 115 aaKnown RBP7.15□□□□□ -1.26
CHD1-208ENST00000512392 HMGN5P82970 282 aaKnown RBP7.15□□□□□ -1.26
CHD1-208ENST00000512392 TBC1D8BQ0IIM8 1120 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 SLMAPQ14BN4 828 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 SV2CQ496J9 727 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 PIK3R6Q5UE93 754 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 FKBP9P1Q75LS8 142 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 CCDC84Q86UT8 332 aaPredicted RBP7.15□□□□□ -1.26
CHD1-208ENST00000512392 TAF4BQ92750 862 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 TM9SF2Q99805 663 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 RANBP17Q9H2T7 1088 aaKnown RBP7.15□□□□□ -1.26
CHD1-208ENST00000512392 UBN1Q9NPG3 1134 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 MKS1Q9NXB0 559 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 SLC6A14Q9UN76 642 aa7.15□□□□□ -1.26
CHD1-208ENST00000512392 ZBTB42B2RXF5 422 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 SHISA8B8ZZ34 492 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 BOLA2-SMG1P6H3BVE0 249 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 XPOTO43592 962 aaKnown RBP7.15□□□□□ -1.27
CHD1-208ENST00000512392 HRGP04196 525 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 ZBTB48P10074 688 aaPredicted RBP7.15□□□□□ -1.27
CHD1-208ENST00000512392 KRT9P35527 623 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 ATXN1P54253 815 aaKnown RBP7.15□□□□□ -1.27
CHD1-208ENST00000512392 PIP4K2BP78356 416 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 GGT6Q6P531 493 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 ERC1Q8IUD2 1116 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 MSANTD4Q8NCY6 345 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 OSBP2Q969R2 916 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 SDF4Q9BRK5 362 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 TRIT1Q9H3H1 467 aaKnown RBP7.15□□□□□ -1.27
CHD1-208ENST00000512392 GRHPRQ9UBQ7 328 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 IKBKGQ9Y6K9 419 aa7.15□□□□□ -1.27
CHD1-208ENST00000512392 DKC1O60832 514 aaKnown RBP eCLIP7.14□□□□□ -1.27
CHD1-208ENST00000512392 VEGFAP15692 232 aaPredicted RBP7.14□□□□□ -1.27
CHD1-208ENST00000512392 TNFSF4P23510 183 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 IL2P60568 153 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 DCAF7P61962 342 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 BTKQ06187 659 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 HYAL2Q12891 473 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 PSMD6Q15008 389 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 IQCA1Q86XH1 822 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 DZIP1LQ8IYY4 767 aaKnown RBP7.14□□□□□ -1.27
CHD1-208ENST00000512392 TRMT2AQ8IZ69 625 aaKnown RBP7.14□□□□□ -1.27
CHD1-208ENST00000512392 ANKRD52Q8NB46 1076 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 UCMAQ8WVF2 138 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 BTN2A2Q8WVV5 523 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 AARSD1Q9BTE6 412 aaKnown RBP7.14□□□□□ -1.27
CHD1-208ENST00000512392 STK31Q9BXU1 1019 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 ABCF3Q9NUQ8 709 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 DACT1Q9NYF0 836 aa7.14□□□□□ -1.27
CHD1-208ENST00000512392 A6NLC8 198 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 GOLGA6L22H0YM25 854 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 FOXN3O00409 490 aaPredicted RBP7.13□□□□□ -1.27
CHD1-208ENST00000512392 PRODHO43272 600 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 H2AFYO75367 372 aaKnown RBP7.13□□□□□ -1.27
CHD1-208ENST00000512392 ATE1O95260 518 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 PABPC1P11940 636 aaKnown RBP7.13□□□□□ -1.27
CHD1-208ENST00000512392 RPL17P18621 184 aaKnown RBP7.13□□□□□ -1.27
CHD1-208ENST00000512392 IGFALSP35858 605 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 PDE6CP51160 858 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 IFIT5Q13325 482 aaKnown RBP7.13□□□□□ -1.27
CHD1-208ENST00000512392 PPP2R5DQ14738 602 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 PRR16Q569H4 304 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 CFAP58Q5T655 872 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 C16orf87Q6PH81 154 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 VSIG1Q86XK7 387 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 CLRN3Q8NCR9 226 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 SMC1BQ8NDV3 1235 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 NEDD1Q8NHV4 660 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 DIS3LQ8TF46 1054 aaKnown RBP7.13□□□□□ -1.27
CHD1-208ENST00000512392 DPF3Q92784 378 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 DIO2Q92813 273 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 HIC2Q96JB3 615 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 TCF12Q99081 682 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 LSM14BQ9BX40 385 aaKnown RBP7.13□□□□□ -1.27
CHD1-208ENST00000512392 CERS4Q9HA82 394 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 EMC7Q9NPA0 242 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 PLSCR4Q9NRQ2 329 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 PIH1D1Q9NWS0 290 aaKnown RBP7.13□□□□□ -1.27
CHD1-208ENST00000512392 BLOC1S6Q9UL45 172 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 TMEM98Q9Y2Y6 226 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 TCRBV16S1A1N1A0A5B0 115 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 BLACEA4D250 179 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 F8W031 263 aaPredicted RBP7.13□□□□□ -1.27
CHD1-208ENST00000512392 KPNA5O15131 536 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 TADA3O75528 432 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 OFD1O75665 1012 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 CYP2E1P05181 493 aaPredicted RBP7.13□□□□□ -1.27
CHD1-208ENST00000512392 ATP6V1B1P15313 513 aa7.13□□□□□ -1.27
CHD1-208ENST00000512392 CES1P23141 567 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms