RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 TRAF6Q9Y4K3 522 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 KIF27Q86VH2 1401 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 NESP48681 1621 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 ARVCFO00192 962 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 KCNQ2O43526 872 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 C6orf222P0C671 652 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 IGFBP6P24592 240 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 GJA4P35212 333 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 NCKAP1LP55160 1127 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 NFKB2Q00653 900 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 CALD1Q05682 793 aaKnown RBP5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 GPR19Q15760 415 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 GGNQ86UU5 652 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 UHMK1Q8TAS1 419 aaKnown RBP5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 CXorf38Q8TB03 319 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 PIP4K2CQ8TBX8 421 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 IPPKQ9H8X2 491 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 TMEM260Q9NX78 707 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 ASH2LQ9UBL3 628 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 FBXL7Q9UJT9 491 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 PCDHA8Q9Y5H6 950 aa5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 CENPJQ9HC77 1338 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P13-201ENST00000511263 ERCC6Q03468 1493 aa5.96□□□□□ -1.45
HMGB3P13-201ENST00000511263 TCRBV5S2A0A599 114 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 PPM1GO15355 546 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 CRTAMO95727 393 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 PTMAP06454 111 aaKnown RBP5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 FBLN1P23142 703 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 DDX53Q86TM3 631 aaKnown RBP5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 TICAM2Q86XR7 235 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 FTSJ3Q8IY81 847 aaKnown RBP5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 ZDHHC14Q8IZN3 488 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 SYT8Q8NBV8 401 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 GSTCDQ8NEC7 633 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 SMARCC2Q8TAQ2 1214 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 TMEM209Q96SK2 561 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 CDIP1Q9H305 208 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 SLC52A2Q9HAB3 445 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 TMA7Q9Y2S6 64 aaKnown RBP5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 HCFC2Q9Y5Z7 792 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 MRC2Q9UBG0 1479 aa5.96□□□□□ -1.46
HMGB3P13-201ENST00000511263 RFPL3O75679 317 aa5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 SASH1O94885 1247 aa5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 C16orf86Q6ZW13 317 aa5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 UBE2R2Q712K3 238 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 KCTD1Q719H9 257 aa5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 ASXL2Q76L83 1435 aa5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 PRRT2Q7Z6L0 340 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 SP8Q8IXZ3 490 aa5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 FAM43AQ8N2R8 423 aa5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 CLIC6Q96NY7 704 aa5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 PDGFDQ9GZP0 370 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 HSPBP1Q9NZL4 362 aa5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 NTMQ9P121 344 aa5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 PCDHA9Q9Y5H5 950 aa5.95□□□□□ -1.46
HMGB3P13-201ENST00000511263 CDC45O75419 566 aa5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 ASLP04424 464 aa5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 PTMSP20962 102 aa5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 IGFALSP35858 605 aa5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 ARHGAP44Q17R89 818 aa5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 FIGNQ5HY92 759 aa5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 DBX2Q6ZNG2 339 aa5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 LINC01356Q8N9X3 169 aa5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 KYQ8NBH2 561 aa5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 PCDH19Q8TAB3 1148 aa5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 CELF4Q9BZC1 486 aaKnown RBP5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 SLKQ9H2G2 1235 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 INTS7Q9NVH2 962 aaKnown RBP5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 TOPBP1Q92547 1522 aa5.94□□□□□ -1.46
HMGB3P13-201ENST00000511263 TOP2BQ02880 1626 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 CCDC66A2RUB6 948 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 SLC27A2O14975 620 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 OPA1O60313 960 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 HIP1RO75146 1068 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 ASMTLO95671 621 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 ENO2P09104 434 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 SRGAP2CP0DJJ0 459 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 COL6A2P12110 1019 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 ATF2P15336 505 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 LIMS1P48059 325 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 DNM2P50570 870 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 EPHA5P54756 1037 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 TUSC3Q13454 348 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 HABP4Q5JVS0 413 aaKnown RBP5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 VASNQ6EMK4 673 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 ARHGAP36Q6ZRI8 547 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 BRAPQ7Z569 592 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 TMEFF1Q8IYR6 380 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 ARRDC4Q8NCT1 418 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 ZBTB8AQ96BR9 441 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 PUS7Q96PZ0 661 aaKnown RBP5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 ADAM7Q9H2U9 754 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 PIF1Q9H611 641 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 CABP5Q9NP86 173 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 MAGEC2Q9UBF1 373 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 PPARGC1AQ9UBK2 798 aaKnown RBP5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 PLAAQ9Y263 795 aa5.93□□□□□ -1.46
HMGB3P13-201ENST00000511263 ATP23Q9Y6H3 246 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms