RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TLCD1Q96CP7 247 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 XPO6Q96QU8 1125 aaKnown RBP17.41■□□□□ 0.38
SCLT1-208ENST00000506368 NSRP1Q9H0G5 558 aaKnown RBP17.41■□□□□ 0.38
SCLT1-208ENST00000506368 PCDHA4Q9UN74 947 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 KLHL33A6NCF5 533 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 TULP1O00294 542 aaPredicted RBP17.41■□□□□ 0.38
SCLT1-208ENST00000506368 BUB1O43683 1085 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 SLC1A4P43007 532 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 ERVK-9P63128 1117 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 GFPT1Q06210 699 aaPredicted RBP17.41■□□□□ 0.38
SCLT1-208ENST00000506368 RPS6KA1Q15418 735 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 UAP1Q16222 522 aaPredicted RBP17.41■□□□□ 0.38
SCLT1-208ENST00000506368 PPP2R5EQ16537 467 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 SLC18A3Q16572 532 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 SFMBT2Q5VUG0 894 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 GBP7Q8N8V2 638 aaPredicted RBP17.41■□□□□ 0.38
SCLT1-208ENST00000506368 DAGLBQ8NCG7 672 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 CCDC26Q8TAB7 109 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 SEC14L1Q92503 715 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 CCDC134Q9H6E4 229 aa17.41■□□□□ 0.38
SCLT1-208ENST00000506368 FAM207AQ9NSI2 230 aaPredicted RBP17.41■□□□□ 0.38
SCLT1-208ENST00000506368 MYH1P12882 1939 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 PVALEFA0A1B0GWK0 134 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 KIF5BP33176 963 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 ORC2Q13416 577 aaPredicted RBP17.4■□□□□ 0.38
SCLT1-208ENST00000506368 TFCP2L1Q9NZI6 479 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 BAIAP2L1Q9UHR4 511 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 NOVA2Q9UNW9 492 aaKnown RBP17.4■□□□□ 0.38
SCLT1-208ENST00000506368 CNTNAP4Q9C0A0 1308 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 PRKAB2O43741 272 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 CCND1P24385 295 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 ZNF131P52739 623 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 TDRD12Q587J7 1177 aaKnown RBP17.4■□□□□ 0.38
SCLT1-208ENST00000506368 NAIF1Q69YI7 327 aaPredicted RBP17.4■□□□□ 0.38
SCLT1-208ENST00000506368 GIGYF2Q6Y7W6 1299 aaKnown RBP17.4■□□□□ 0.38
SCLT1-208ENST00000506368 PIGWQ7Z7B1 504 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 GUF1Q8N442 669 aaKnown RBP17.4■□□□□ 0.38
SCLT1-208ENST00000506368 NSMCE1Q8WV22 266 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 SAAL1Q96ER3 474 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 FAM89AQ96GI7 184 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 GREM2Q9H772 168 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 RIC8AQ9NPQ8 531 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 TRPC6Q9Y210 931 aa17.4■□□□□ 0.38
SCLT1-208ENST00000506368 CCDC194A0A1B0GVG4 234 aa17.39■□□□□ 0.37
SCLT1-208ENST00000506368 ANXA13P27216 316 aa17.39■□□□□ 0.37
SCLT1-208ENST00000506368 GCKP35557 465 aa17.39■□□□□ 0.37
SCLT1-208ENST00000506368 USP11P51784 963 aa17.39■□□□□ 0.37
SCLT1-208ENST00000506368 ASIC1P78348 528 aa17.39■□□□□ 0.37
SCLT1-208ENST00000506368 STK4Q13043 487 aa17.39■□□□□ 0.37
SCLT1-208ENST00000506368 SPRED3Q2MJR0 410 aa17.39■□□□□ 0.37
SCLT1-208ENST00000506368 CCDC178Q5BJE1 867 aa17.39■□□□□ 0.37
SCLT1-208ENST00000506368 CDCA2Q69YH5 1023 aaPredicted RBP17.39■□□□□ 0.37
SCLT1-208ENST00000506368 BRIP1Q9BX63 1249 aa17.39■□□□□ 0.37
SCLT1-208ENST00000506368 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.39■□□□□ 0.37
SCLT1-208ENST00000506368 SAMD15Q9P1V8 674 aa17.39■□□□□ 0.37
SCLT1-208ENST00000506368 CORO1CQ9ULV4 474 aaPredicted RBP17.39■□□□□ 0.37
SCLT1-208ENST00000506368 ATP6V0A2Q9Y487 856 aa17.39■□□□□ 0.37
SCLT1-208ENST00000506368 PGRMC1O00264 195 aaKnown RBP17.38■□□□□ 0.37
SCLT1-208ENST00000506368 TMOD1P28289 359 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 MAGOHP61326 146 aaKnown RBP17.38■□□□□ 0.37
SCLT1-208ENST00000506368 RASGRF1Q13972 1273 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 SLC15A2Q16348 729 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 CABP7Q86V35 215 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 ZNF483Q8TF39 744 aaPredicted RBP17.38■□□□□ 0.37
SCLT1-208ENST00000506368 UBLCP1Q8WVY7 318 aaPredicted RBP17.38■□□□□ 0.37
SCLT1-208ENST00000506368 ANKS1AQ92625 1134 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 MAGOHBQ96A72 148 aaKnown RBP17.38■□□□□ 0.37
SCLT1-208ENST00000506368 TSG101Q99816 390 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 PLCD4Q9BRC7 762 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 LRRC27Q9C0I9 530 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 ANKRD33BA6NCL7 494 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 MAP2K1Q02750 393 aaPredicted RBP17.38■□□□□ 0.37
SCLT1-208ENST00000506368 PSMD2Q13200 908 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 KRT71Q3SY84 523 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 AP1ARQ63HQ0 302 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 TMC3Q7Z5M5 1100 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 SRBD1Q8N5C6 995 aaKnown RBP17.38■□□□□ 0.37
SCLT1-208ENST00000506368 CNKSR1Q969H4 720 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 PGM2Q96G03 612 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 ZNF317Q96PQ6 595 aaPredicted RBP17.38■□□□□ 0.37
SCLT1-208ENST00000506368 STMN4Q9H169 189 aaPredicted RBP17.38■□□□□ 0.37
SCLT1-208ENST00000506368 CNOT8Q9UFF9 292 aaKnown RBP17.38■□□□□ 0.37
SCLT1-208ENST00000506368 FBXL5Q9UKA1 691 aa17.38■□□□□ 0.37
SCLT1-208ENST00000506368 ANKRD36CQ5JPF3 1778 aa17.37■□□□□ 0.37
SCLT1-208ENST00000506368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.37■□□□□ 0.37
SCLT1-208ENST00000506368 F8W031 263 aaPredicted RBP17.37■□□□□ 0.37
SCLT1-208ENST00000506368 EPHB6O15197 1021 aa17.37■□□□□ 0.37
SCLT1-208ENST00000506368 NUDT17P0C025 328 aa17.37■□□□□ 0.37
SCLT1-208ENST00000506368 ADCY2Q08462 1091 aa17.37■□□□□ 0.37
SCLT1-208ENST00000506368 R3HDM1Q15032 1099 aaKnown RBP17.37■□□□□ 0.37
SCLT1-208ENST00000506368 CLUL1Q15846 466 aa17.37■□□□□ 0.37
SCLT1-208ENST00000506368 RC3H1Q5TC82 1133 aaKnown RBP17.37■□□□□ 0.37
SCLT1-208ENST00000506368 BZW1Q7L1Q6 419 aaKnown RBP17.37■□□□□ 0.37
SCLT1-208ENST00000506368 KLHL7Q8IXQ5 586 aa17.37■□□□□ 0.37
SCLT1-208ENST00000506368 LMBR1Q8WVP7 490 aa17.37■□□□□ 0.37
SCLT1-208ENST00000506368 L3MBTL3Q96JM7 780 aaPredicted RBP17.37■□□□□ 0.37
SCLT1-208ENST00000506368 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCLT1-208ENST00000506368 SEMA6BQ9H3T3 888 aa17.37■□□□□ 0.37
SCLT1-208ENST00000506368 FLT1P17948 1338 aa17.37■□□□□ 0.37
SCLT1-208ENST00000506368 F8VZ95 297 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms