RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ARHGAP36Q6ZRI8 547 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 OSTM1Q86WC4 334 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 TRIM48Q8IWZ4 208 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 JMYQ8N9B5 988 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 TXNDC5Q8NBS9 432 aaKnown RBP5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 FBXW5Q969U6 566 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 SCLYQ96I15 445 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 CLIC6Q96NY7 704 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 CATSPERZQ9NTU4 200 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 NCANO14594 1321 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 CCDC66A2RUB6 948 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 FAM90A27PA6NNH2 459 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 MAN2B1O00754 1011 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 PRRG2O14669 202 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 WNT9AO14904 365 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 GLRBP48167 497 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 DNM2P50570 870 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 EPHA5P54756 1037 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 JAM2P57087 298 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 SKOR2Q2VWA4 1001 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 CD276Q5ZPR3 534 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 VASNQ6EMK4 673 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 BRAPQ7Z569 592 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 FGD2Q7Z6J4 655 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 ZC3H7AQ8IWR0 971 aaKnown RBP5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 CISD2Q8N5K1 135 aaKnown RBP5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 DTX3Q8N9I9 347 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 GSTCDQ8NEC7 633 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 ZSWIM2Q8NEG5 633 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 CXorf38Q8TB03 319 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 THAP3Q8WTV1 239 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 TMEM209Q96SK2 561 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 BDH2Q9BUT1 245 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 SRPK3Q9UPE1 567 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 COQ6Q9Y2Z9 468 aa5.23□□□□□ -1.57
HMGB1P29-201ENST00000505659 ZNF561-AS1K7EIQ3 104 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 CKMP06732 381 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 COL6A1P12109 1028 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 SYN1P17600 705 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 IL13P35225 146 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 SQSTM1Q13501 440 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 GPR19Q15760 415 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 SKIDA1Q1XH10 827 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 UBXN11Q5T124 520 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 NPM2Q86SE8 214 aaKnown RBP5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 ZSWIM4Q9H7M6 989 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 SMURF1Q9HCE7 757 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 SLC39A2Q9NP94 309 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 HSPBP1Q9NZL4 362 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 SFMBT1Q9UHJ3 866 aa5.22□□□□□ -1.57
HMGB1P29-201ENST00000505659 PTPN1P18031 435 aaKnown RBP5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 PFKPQ01813 784 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 SEC23AQ15436 765 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 CCDC144BQ3MJ40 725 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 TM4SF20Q53R12 229 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 TRIM61Q5EBN2 209 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 FAM26FQ5R3K3 315 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 BTBD8Q5XKL5 378 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 ABHD17CQ6PCB6 329 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 TRMT10BQ6PF06 316 aaKnown RBP5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 C16orf59Q7L2K0 433 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 NUDT10Q8NFP7 164 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 NUDT11Q96G61 164 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 YTHDC1Q96MU7 727 aaKnown RBP5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 PIF1Q9H611 641 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 L2HGDHQ9H9P8 463 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 NCOA5Q9HCD5 579 aaKnown RBP5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 DLL4Q9NR61 685 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 RIC8BQ9NVN3 520 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 ZFP69BQ9UJL9 534 aa5.21□□□□□ -1.58
HMGB1P29-201ENST00000505659 MROH6A6NGR9 719 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 ZNF839A8K0R7 811 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 RAPGEF3O95398 923 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 IL18BPO95998 194 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 CYP1A1P04798 512 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 ST5P78524 1137 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 ZC3H12BQ5HYM0 836 aaKnown RBP5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 CPZQ66K79 652 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 STPG3Q8N7X2 389 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 MBD6Q96DN6 1003 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 DRC1Q96MC2 740 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 CLUHP3Q96NS8 147 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 PDGFDQ9GZP0 370 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 TRIM39Q9HCM9 518 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 INVSQ9Y283 1065 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 NUB1Q9Y5A7 615 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 ATP23Q9Y6H3 246 aa5.2□□□□□ -1.58
HMGB1P29-201ENST00000505659 TCRBV16S1A1N1A0A5B0 115 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 B4GALT3O60512 393 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 KCNA6P17658 529 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 KRTAP10-2P60368 255 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 DBPQ10586 325 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 NFE2L2Q16236 605 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 CRY1Q16526 586 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 FIGNQ5HY92 759 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 ZFYVE27Q5T4F4 411 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 SH3TC2Q8TF17 1288 aa5.19□□□□□ -1.58
HMGB1P29-201ENST00000505659 LCORQ96JN0 433 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms