RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 KIZQ2M2Z5 673 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 PGS1Q32NB8 556 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 AGAP9Q5VTM2 703 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 IZUMO3Q5VZ72 239 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 ITPRIPL1Q6GPH6 555 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 FOXR1Q6PIV2 292 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 NPNTQ6UXI9 565 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 RSPO2Q6UXX9 243 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 LBX2Q6XYB7 198 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 FRMD7Q6ZUT3 714 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 USP45Q70EL2 814 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 PDZD4Q76G19 769 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 LIX1LQ8IVB5 337 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 SYTL1Q8IYJ3 562 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 MSL3Q8N5Y2 521 aaKnown RBP4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 ZNF527Q8NB42 609 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 RNF214Q8ND24 703 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 WNT8BQ93098 351 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 FERMT2Q96AC1 680 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 KLHDC7BQ96G42 594 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 UBXN10Q96LJ8 280 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 BOCQ9BWV1 1114 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 FOXQ1Q9C009 403 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 ZDHHC5Q9C0B5 715 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 PRDM14Q9GZV8 571 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 ASCC2Q9H1I8 757 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 TMEM60Q9H2L4 133 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 LGR6Q9HBX8 967 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 RIC8AQ9NPQ8 531 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 VPS45Q9NRW7 570 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 NDFIP2Q9NV92 336 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 CLEC1BQ9P126 229 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 LRFN1Q9P244 771 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 HCSTQ9UBK5 93 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 PGAP2Q9UHJ9 254 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 DNMT3LQ9UJW3 386 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 HCN2Q9UL51 889 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 PCDHA2Q9Y5H9 948 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 ERBB4Q15303 1308 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 ITIH6Q6UXX5 1313 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 A0A087WV62 115 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 SENP3-EIF4A1A0A087X0R7 540 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 A0A1W2PRQ8 180 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 TSPY2A6NKD2 308 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 H0Y8X5 98 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 K7ENM7 598 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 EIF3FO00303 357 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 KCNK3O14649 394 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 SIN3BO75182 1162 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 TIPRLO75663 272 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 GFPT2O94808 682 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 CSTBP04080 98 aaKnown RBP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 TSPY3P0CV98 308 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 TSPY8P0CW00 308 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 LCP1P13796 627 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 PLS3P13797 630 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 RXRBP28702 533 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 STT3AP46977 705 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 FXR1P51114 621 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 MECP2P51608 486 aaKnown RBP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 KIF11P52732 1056 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 SLC16A1P53985 500 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 IRF9Q00978 393 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 TSPY1Q01534 308 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 PRKG1Q13976 671 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 SLBPQ14493 270 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 TTLL4Q14679 1199 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 SUZ12Q15022 739 aaKnown RBP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 PDCD1Q15116 288 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 CNN3Q15417 329 aaKnown RBP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 HSF5Q4G112 596 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 DGKKQ5KSL6 1271 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 FKBP15Q5T1M5 1219 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 FAM182BQ5T319 152 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 ZNF468Q5VIY5 522 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 TSHZ3Q63HK5 1081 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 RETSATQ6NUM9 610 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 C1orf122Q6ZSJ8 110 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 CDH24Q86UP0 819 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 KSR1Q8IVT5 923 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 SIRT2Q8IXJ6 389 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 FAM26EQ8N5C1 309 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 ZNF610Q8N9Z0 462 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 KREMEN2Q8NCW0 462 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 IL17REQ8NFR9 667 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 ACAP3Q96P50 834 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 ELF4Q99607 663 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 BARD1Q99728 777 aaKnown RBP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 MIPEPQ99797 713 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 NUDT16L1Q9BRJ7 211 aaKnown RBP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 AP1M1Q9BXS5 423 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 ATXN3LQ9H3M9 355 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 UNC45AQ9H3U1 944 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 JPH1Q9HDC5 661 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 PRDM6Q9NQX0 595 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 HELLSQ9NRZ9 838 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 MBIPQ9NS73 344 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 BLOC1S4Q9NUP1 217 aa4.28□□□□□ -1.72
HMGB1P22-201ENST00000505315 GPATCH2Q9NW75 528 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms