RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 ZNF713Q8N859 430 aaPredicted RBP22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 GLT8D2Q9H1C3 349 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 JADE2Q9NQC1 790 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 INSL6Q9Y581 213 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 ATP9AO75110 1047 aa22.87■■□□□ 1.25
UBE2D3-220ENST00000505307 FOSP01100 380 aaPredicted RBP22.87■■□□□ 1.25
UBE2D3-220ENST00000505307 ARHGAP4P98171 946 aa22.87■■□□□ 1.25
UBE2D3-220ENST00000505307 MKRN4PQ13434 485 aaPredicted RBP22.87■■□□□ 1.25
UBE2D3-220ENST00000505307 TAF2Q6P1X5 1199 aa22.87■■□□□ 1.25
UBE2D3-220ENST00000505307 RPAINQ86UA6 219 aa22.87■■□□□ 1.25
UBE2D3-220ENST00000505307 APBB2Q92870 758 aa22.87■■□□□ 1.25
UBE2D3-220ENST00000505307 TGS1Q96RS0 853 aaKnown RBP22.87■■□□□ 1.25
UBE2D3-220ENST00000505307 ERAP1Q9NZ08 941 aa22.87■■□□□ 1.25
UBE2D3-220ENST00000505307 PRRC2BQ5JSZ5 2229 aaKnown RBP22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 CNTNAP5Q8WYK1 1306 aa22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 TRANK1O15050 2925 aa22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 LCHNA4D1U4 455 aa22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 TNFRSF10AO00220 468 aa22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 ERVK-21P61565 698 aa22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 GRB10Q13322 594 aa22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 SKIV2LQ15477 1246 aaKnown RBP22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 FAM26DQ5JW98 314 aa22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 TMCO2Q7Z6W1 182 aaPredicted RBP22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 LMBR1Q8WVP7 490 aa22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 SMARCAD1Q9H4L7 1026 aa22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 RIC8AQ9NPQ8 531 aa22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 COG5Q9UP83 839 aa22.86■■□□□ 1.25
UBE2D3-220ENST00000505307 PTPRSQ13332 1948 aa22.85■■□□□ 1.25
UBE2D3-220ENST00000505307 RPLP2P05387 115 aaKnown RBP22.85■■□□□ 1.25
UBE2D3-220ENST00000505307 NAPAP54920 295 aa22.85■■□□□ 1.25
UBE2D3-220ENST00000505307 WWC2Q6AWC2 1192 aa22.85■■□□□ 1.25
UBE2D3-220ENST00000505307 RSPH3Q86UC2 560 aa22.85■■□□□ 1.25
UBE2D3-220ENST00000505307 RASEFQ8IZ41 740 aa22.85■■□□□ 1.25
UBE2D3-220ENST00000505307 TNPO1Q92973 898 aaKnown RBP22.85■■□□□ 1.25
UBE2D3-220ENST00000505307 GSTTP1A0A1W2PQM5 241 aa22.84■■□□□ 1.25
UBE2D3-220ENST00000505307 LINC01553A4QN01 128 aa22.84■■□□□ 1.25
UBE2D3-220ENST00000505307 CTSHP09668 335 aa22.84■■□□□ 1.25
UBE2D3-220ENST00000505307 FUT2Q10981 343 aa22.84■■□□□ 1.25
UBE2D3-220ENST00000505307 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.84■■□□□ 1.254e-6■■■□□ 19.2
UBE2D3-220ENST00000505307 MYOCDQ8IZQ8 938 aa22.84■■□□□ 1.25
UBE2D3-220ENST00000505307 ADAMTS19Q8TE59 1207 aa22.84■■□□□ 1.25
UBE2D3-220ENST00000505307 GLG1Q92896 1179 aa22.84■■□□□ 1.25
UBE2D3-220ENST00000505307 MXRA8Q9BRK3 442 aa22.84■■□□□ 1.25
UBE2D3-220ENST00000505307 BRPF3Q9ULD4 1205 aa22.84■■□□□ 1.25
UBE2D3-220ENST00000505307 TELO2Q9Y4R8 837 aa22.84■■□□□ 1.25
UBE2D3-220ENST00000505307 V9GY48 417 aaPredicted RBP22.84■■□□□ 1.25
UBE2D3-220ENST00000505307 CCDC196A0A1B0GTZ2 297 aa22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 GOLGA8AA7E2F4 631 aa22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 GOLGA8BA8MQT2 603 aa22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 LPXNO60711 386 aa22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 ADCY7P51828 1080 aa22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 HTRA4P83105 476 aaPredicted RBP22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 PPFIA1Q13136 1202 aa22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 ADCK5Q3MIX3 580 aa22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 FAM117BQ6P1L5 589 aa22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 JPH1Q9HDC5 661 aaPredicted RBP22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 KCNH7Q9NS40 1196 aa22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 BARHL2Q9NY43 387 aa22.83■■□□□ 1.25
UBE2D3-220ENST00000505307 DOCK5Q9H7D0 1870 aa22.83■■□□□ 1.24
UBE2D3-220ENST00000505307 KLF18A0A0U1RQI7 1052 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 RBAK-RBAKDNI3L0D1 243 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 FGD1P98174 961 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 AP3B2Q13367 1082 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 SKAP1Q86WV1 359 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 SP7Q8TDD2 431 aaPredicted RBP22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 TOP1MTQ969P6 601 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 TCEANC2Q96MN5 208 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 SAMD11Q96NU1 681 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 SDF4Q9BRK5 362 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 SUGCTQ9HAC7 445 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 SLC9A2Q9UBY0 812 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 KAT6AQ92794 2004 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 NFASCO94856 1347 aa22.82■■□□□ 1.24
UBE2D3-220ENST00000505307 MBLAC1A4D2B0 266 aaPredicted RBP22.81■■□□□ 1.24
UBE2D3-220ENST00000505307 SMCO2A6NFE2 343 aa22.81■■□□□ 1.24
UBE2D3-220ENST00000505307 RRN3P2A6NIE6 340 aa22.81■■□□□ 1.24
UBE2D3-220ENST00000505307 GRIK4Q16099 956 aa22.81■■□□□ 1.24
UBE2D3-220ENST00000505307 CEP55Q53EZ4 464 aa22.81■■□□□ 1.24
UBE2D3-220ENST00000505307 KCNB2Q92953 911 aa22.81■■□□□ 1.24
UBE2D3-220ENST00000505307 UHRF1Q96T88 793 aaPredicted RBP22.81■■□□□ 1.24
UBE2D3-220ENST00000505307 IFIH1Q9BYX4 1025 aaKnown RBP22.81■■□□□ 1.24
UBE2D3-220ENST00000505307 AZI2Q9H6S1 392 aa22.81■■□□□ 1.24
UBE2D3-220ENST00000505307 PKD2L1Q9P0L9 805 aa22.81■■□□□ 1.24
UBE2D3-220ENST00000505307 TUBE1Q9UJT0 475 aa22.81■■□□□ 1.24
UBE2D3-220ENST00000505307 STXBP3O00186 592 aa22.8■■□□□ 1.24
UBE2D3-220ENST00000505307 BMP1P13497 986 aa22.8■■□□□ 1.24
UBE2D3-220ENST00000505307 KRT40Q6A162 431 aa22.8■■□□□ 1.24
UBE2D3-220ENST00000505307 TYW1BQ6NUM6 668 aa22.8■■□□□ 1.24
UBE2D3-220ENST00000505307 SPRED2Q7Z698 418 aa22.8■■□□□ 1.24
UBE2D3-220ENST00000505307 HLA-CQ95604 372 aa22.8■■□□□ 1.24
UBE2D3-220ENST00000505307 ANO3Q9BYT9 981 aa22.8■■□□□ 1.24
UBE2D3-220ENST00000505307 MICAL3Q7RTP6 2002 aa22.8■■□□□ 1.24
UBE2D3-220ENST00000505307 NCOR1O75376 2440 aa22.79■■□□□ 1.24
UBE2D3-220ENST00000505307 CHRNA1P02708 482 aa22.79■■□□□ 1.24
UBE2D3-220ENST00000505307 MARK3P27448 753 aa22.79■■□□□ 1.24
UBE2D3-220ENST00000505307 SREBF1P36956 1147 aa22.79■■□□□ 1.24
UBE2D3-220ENST00000505307 MCTP2Q6DN12 878 aa22.79■■□□□ 1.24
UBE2D3-220ENST00000505307 NIPA1Q7RTP0 329 aa22.79■■□□□ 1.24
UBE2D3-220ENST00000505307 GDPD5Q8WTR4 605 aa22.79■■□□□ 1.24
UBE2D3-220ENST00000505307 YME1L1Q96TA2 773 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms