RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 HAUS2Q9NVX0 235 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 HSP90AA5PQ58FG0 334 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 TRIM10Q9UDY6 481 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 NOD1Q9Y239 953 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 ZBTB1Q9Y2K1 713 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 CDHR2Q9BYE9 1310 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 MYO3AQ8NEV4 1616 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 LMNB2Q03252 620 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 PSTPIP2Q9H939 334 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 MYO1FO00160 1098 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 PPP4R3CPQ6ZMV5 832 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 CCDC89Q8N998 374 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 IL17RAQ96F46 866 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 OVOS2A0A0J9YW53 1432 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 OVOS2Q6IE36 1432 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 SRGNP10124 158 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 KIF22Q14807 665 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 TRAPPC11Q7Z392 1133 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 RPUSD2Q8IZ73 545 aaKnown RBP18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 TBCKQ8TEA7 893 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 UIMC1Q96RL1 719 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.66■□□□□ 0.583e-7■■■□□ 16
HMGXB3-201ENST00000502717 TCHPQ9BT92 498 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 ADGRB2O60241 1585 aa18.66■□□□□ 0.58
HMGXB3-201ENST00000502717 CCDC14Q49A88 953 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 DCUN1D2Q6PH85 259 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 SUGP1Q8IWZ8 645 aaKnown RBP18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 EMILIN3Q9NT22 766 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 FBXL5Q9UKA1 691 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 PVALEFA0A1B0GWK0 134 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 PPIP5K2O43314 1243 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 DCTN3O75935 186 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 RABL6Q3YEC7 729 aaPredicted RBP18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 KRT26Q7Z3Y9 468 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 PDCD7Q8N8D1 485 aaKnown RBP18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 ZIM3Q96PE6 472 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 MAP3K7O43318 606 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 SEPT14Q6ZU15 432 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 TEX2Q8IWB9 1127 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 ZBTB21Q9ULJ3 1066 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 PPP1R9AQ9ULJ8 1098 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 ADAMTS13Q76LX8 1427 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 TNFAIP1Q13829 316 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 PTGISQ16647 500 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 GDAP1Q8TB36 358 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 PITPNM3Q9BZ71 974 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 SLC40A1Q9NP59 571 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 ANAPC5Q9UJX4 755 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 HPSEQ9Y251 543 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 USH1CQ9Y6N9 552 aa18.65■□□□□ 0.58
HMGXB3-201ENST00000502717 POC1B-GALNT4F8VUJ3 575 aa18.64■□□□□ 0.58
HMGXB3-201ENST00000502717 PMS2P54278 862 aa18.64■□□□□ 0.58
HMGXB3-201ENST00000502717 SGO2Q562F6 1265 aa18.64■□□□□ 0.58
HMGXB3-201ENST00000502717 GJA10Q969M2 543 aa18.64■□□□□ 0.58
HMGXB3-201ENST00000502717 IWS1Q96ST2 819 aa18.64■□□□□ 0.58
HMGXB3-201ENST00000502717 PFDN1O60925 122 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 GFPT2O94808 682 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 IFNB1P01574 187 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 SLC1A4P43007 532 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 FAM83BQ5T0W9 1011 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 FAM170AA1A519 330 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 PSMC2P35998 433 aaKnown RBP18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 ST3GAL1Q11201 340 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 SNX24Q9Y343 169 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 VIRMAQ69YN4 1812 aaKnown RBP18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 KRT14P02533 472 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 NT5C2P49902 561 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 CHRNDQ07001 517 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 ZNF526Q8TF50 670 aaPredicted RBP18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 CYFIP2Q96F07 1278 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 THOC1Q96FV9 657 aaKnown RBP18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 DDX47Q9H0S4 455 aaKnown RBP18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 RAB20Q9NX57 234 aa18.64■□□□□ 0.57
HMGXB3-201ENST00000502717 hCG_1984214I3L0E3 225 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 PFKFB3Q16875 520 aaPredicted RBP18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 ADSSL1Q8N142 457 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 ZNF713Q8N859 430 aaPredicted RBP18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 MAP2K7O14733 419 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 CRKLP46109 303 aaKnown RBP18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 BYSLQ13895 437 aaKnown RBP18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 GCNT4Q9P109 453 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 STOML1Q9UBI4 398 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 PLEKHG2Q9H7P9 1386 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 KDM7AQ6ZMT4 941 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 PACS2Q86VP3 889 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 TPH2Q8IWU9 490 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 FAM178BQ8IXR5 827 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 SGSM3Q96HU1 749 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 SEC16BQ96JE7 1060 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 STAG2Q8N3U4 1231 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 C3orf20Q8ND61 904 aa18.63■□□□□ 0.57
HMGXB3-201ENST00000502717 DEPDC5O75140 1603 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 ERVV-1B6SEH8 477 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 TMED2Q15363 201 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 AGBL2Q5U5Z8 902 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 RHOT2Q8IXI1 618 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 FAM186BQ8IYM0 893 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 CFAP57Q96MR6 1250 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 ECT2Q9H8V3 914 aa18.62■□□□□ 0.57
HMGXB3-201ENST00000502717 MIF4GDA9UHW6 222 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms