RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ACRBPQ8NEB7 543 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 ADCY4Q8NFM4 1077 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 HSPBAP1Q96EW2 488 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 MENTQ9BUN1 341 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 KCNF1Q9H3M0 494 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 CEP131Q9UPN4 1083 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 APOBEC2Q9Y235 224 aaKnown RBP5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 FRMD4BQ9Y2L6 1034 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 KDM5DQ9BY66 1539 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 FAM135AQ9P2D6 1515 aa5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 SPAG9O60271 1321 aaKnown RBP5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P21-201ENST00000502313 ADGBQ8N7X0 1667 aa5.15□□□□□ -1.58
HMGB1P21-201ENST00000502313 ADGRL2O95490 1459 aa5.15□□□□□ -1.58
HMGB1P21-201ENST00000502313 C9IYK1 514 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 C9orf172C9J069 976 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 PCDHGA12O60330 932 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 CTNND1O60716 968 aaKnown RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 IL33O95760 270 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 ITGAVP06756 1048 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 NTF4P34130 210 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 DDIT3P35638 169 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 IGFALSP35858 605 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 ADCYAP1R1P41586 468 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 KCNJ6P48051 423 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 IREB2P48200 963 aaKnown RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 ERVK-21P61565 698 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 SNRPNP63162 240 aaKnown RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 HTRA3P83110 453 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 AUHQ13825 339 aaKnown RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 LLGL1Q15334 1064 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 PIK3R6Q5UE93 754 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 PGM2L1Q6PCE3 622 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 PAOXQ6QHF9 649 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 UBE2R2Q712K3 238 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 RSRC2Q7L4I2 434 aaKnown RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 ZNF227Q86WZ6 799 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 CMTR2Q8IYT2 770 aaKnown RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 C7orf61Q8IZ16 206 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 BVESQ8NE79 360 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 GSTCDQ8NEC7 633 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 RNF141Q8WVD5 230 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 SNRNP27Q8WVK2 155 aaKnown RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 KREMEN1Q96MU8 473 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 AIFM3Q96NN9 605 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 CRB3Q9BUF7 120 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 KLHL25Q9H0H3 589 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 CSRNP2Q9H175 543 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 TRMT13Q9NUP7 481 aaKnown RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 SUSD2Q9UGT4 822 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 KCNH3Q9ULD8 1083 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 AKT3Q9Y243 479 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 DIS3Q9Y2L1 958 aaKnown RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 PCDHGA9Q9Y5G4 932 aaKnown RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 PCDHGA8Q9Y5G5 932 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 PCDHGA7Q9Y5G6 932 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 PCDHGA6Q9Y5G7 932 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 PCDHGA3Q9Y5H0 932 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 PCDHGA2Q9Y5H1 932 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 SLC4A7Q9Y6M7 1214 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 VWDEQ8N2E2 1590 aa5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 RNF17Q9BXT8 1623 aaKnown RBP5.15□□□□□ -1.59
HMGB1P21-201ENST00000502313 NPATQ14207 1427 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 NCOA1Q15788 1441 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 J3KRW8 73 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 TBX1O43435 398 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 AP1G1O43747 822 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 ORC4O43929 436 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 ALX3O95076 343 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 PTMAP06454 111 aaKnown RBP5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 NFICP08651 508 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 FGFR1P11362 822 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 RHCEP18577 417 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 POLD1P28340 1107 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 CHKAP35790 457 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 CCT5P48643 541 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 EIF5P55010 431 aaKnown RBP5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 IL2P60568 153 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 RHDQ02161 417 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 TBX2Q13207 712 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 CNGB1Q14028 1251 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 SLC9A5Q14940 896 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 GRIK4Q16099 956 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 TMEM240Q5SV17 173 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 CWF19L1Q69YN2 538 aaKnown RBP5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 SHISA2Q6UWI4 295 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 B3GNT9Q6UX72 402 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 ARHGAP27Q6ZUM4 889 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 CHST15Q7LFX5 561 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 UBE3DQ7Z6J8 389 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 CDH24Q86UP0 819 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 TOP6BLQ8N6T0 577 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 C1orf162Q8NEQ5 155 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 SLC35G2Q8TBE7 412 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 FBLIM1Q8WUP2 373 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 CCT6BQ92526 530 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 WNK4Q96J92 1243 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 COX4I2Q96KJ9 171 aa5.14□□□□□ -1.59
HMGB1P21-201ENST00000502313 SGCZQ96LD1 299 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms