RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 PRKAG3Q9UGI9 489 aa17■□□□□ 0.31
TRAF4-212ENST00000498540 ZNF215Q9UL58 517 aaPredicted RBP17■□□□□ 0.31
TRAF4-212ENST00000498540 FAM50BQ9Y247 325 aa17■□□□□ 0.31
TRAF4-212ENST00000498540 KIAA1671Q9BY89 1806 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 PNMA6FA0A0J9YX94 578 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 C5orf67F2Z3F1 127 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 GRM6O15303 877 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 FIBPO43427 364 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 STAM2O75886 525 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 CHRNA1P02708 482 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 GHRP10912 638 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 DLX2Q07687 328 aaPredicted RBP16.99■□□□□ 0.31
TRAF4-212ENST00000498540 TRAF1Q13077 416 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 CLUL1Q15846 466 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 RUFY4Q6ZNE9 571 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 ADHFE1Q8IWW8 467 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 PIBF1Q8WXW3 757 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 RC3H2Q9HBD1 1191 aaKnown RBP16.99■□□□□ 0.31
TRAF4-212ENST00000498540 ZNF318Q5VUA4 2279 aa16.99■□□□□ 0.31
TRAF4-212ENST00000498540 ADGRA3Q8IWK6 1321 aa16.98■□□□□ 0.31
TRAF4-212ENST00000498540 CSPG5O95196 566 aa16.98■□□□□ 0.31
TRAF4-212ENST00000498540 IGHDP01880 384 aa16.98■□□□□ 0.31
TRAF4-212ENST00000498540 IRS1P35568 1242 aa16.98■□□□□ 0.31
TRAF4-212ENST00000498540 HYAL1Q12794 435 aa16.98■□□□□ 0.31
TRAF4-212ENST00000498540 CTC1Q2NKJ3 1217 aa16.98■□□□□ 0.31
TRAF4-212ENST00000498540 C11orf84Q9BUA3 381 aaPredicted RBP16.98■□□□□ 0.31
TRAF4-212ENST00000498540 RWDD1Q9H446 243 aaPredicted RBP16.98■□□□□ 0.31
TRAF4-212ENST00000498540 WDFY4Q6ZS81 3184 aa16.98■□□□□ 0.31
TRAF4-212ENST00000498540 TTC3P53804 2025 aa16.97■□□□□ 0.31
TRAF4-212ENST00000498540 TRIOO75962 3097 aa16.97■□□□□ 0.31
TRAF4-212ENST00000498540 IFIT3O14879 490 aaKnown RBP16.97■□□□□ 0.31
TRAF4-212ENST00000498540 RB1P06400 928 aa16.97■□□□□ 0.31
TRAF4-212ENST00000498540 GTF2F1P35269 517 aaKnown RBP eCLIP16.97■□□□□ 0.311e-10■■■■□ 26.4
TRAF4-212ENST00000498540 BMPR1AP36894 532 aa16.97■□□□□ 0.31
TRAF4-212ENST00000498540 NHLH1Q02575 133 aa16.97■□□□□ 0.31
TRAF4-212ENST00000498540 MGAT3Q09327 533 aa16.97■□□□□ 0.31
TRAF4-212ENST00000498540 TROAPQ12815 778 aa16.97■□□□□ 0.31
TRAF4-212ENST00000498540 LPIN1Q14693 890 aa16.97■□□□□ 0.31
TRAF4-212ENST00000498540 FBXL18Q96ME1 805 aa16.97■□□□□ 0.31
TRAF4-212ENST00000498540 EHMT1Q9H9B1 1298 aa16.97■□□□□ 0.31
TRAF4-212ENST00000498540 NRCAMQ92823 1304 aa16.96■□□□□ 0.31
TRAF4-212ENST00000498540 NCK2O43639 380 aa16.96■□□□□ 0.31
TRAF4-212ENST00000498540 TBX10O75333 385 aa16.96■□□□□ 0.31
TRAF4-212ENST00000498540 MRE11P49959 708 aa16.96■□□□□ 0.31
TRAF4-212ENST00000498540 TRDNQ13061 729 aa16.96■□□□□ 0.31
TRAF4-212ENST00000498540 SMAD2Q15796 467 aaKnown RBP16.96■□□□□ 0.31
TRAF4-212ENST00000498540 PCNX4Q63HM2 1172 aa16.96■□□□□ 0.31
TRAF4-212ENST00000498540 USP17L6PQ6QN14 398 aa16.96■□□□□ 0.31
TRAF4-212ENST00000498540 HFE2Q6ZVN8 426 aa16.96■□□□□ 0.31
TRAF4-212ENST00000498540 CLP1Q92989 425 aaKnown RBP16.96■□□□□ 0.31
TRAF4-212ENST00000498540 SENP7Q9BQF6 1050 aa16.96■□□□□ 0.31
TRAF4-212ENST00000498540 LMAN2LQ9H0V9 348 aa16.96■□□□□ 0.31
TRAF4-212ENST00000498540 TAF6LQ9Y6J9 622 aa16.96■□□□□ 0.31
TRAF4-212ENST00000498540 LINC01565O15544 149 aa16.95■□□□□ 0.3
TRAF4-212ENST00000498540 MBTPS2O43462 519 aa16.95■□□□□ 0.3
TRAF4-212ENST00000498540 CYP21A2P08686 494 aa16.95■□□□□ 0.3
TRAF4-212ENST00000498540 TCF7P36402 384 aaPredicted RBP16.95■□□□□ 0.3
TRAF4-212ENST00000498540 WTAPQ15007 396 aa16.95■□□□□ 0.3
TRAF4-212ENST00000498540 SMARCC2Q8TAQ2 1214 aa16.95■□□□□ 0.3
TRAF4-212ENST00000498540 ZNF689Q96CS4 500 aaPredicted RBP16.95■□□□□ 0.3
TRAF4-212ENST00000498540 MUTYHQ9UIF7 546 aa16.95■□□□□ 0.3
TRAF4-212ENST00000498540 RWDD3Q9Y3V2 267 aa16.95■□□□□ 0.3
TRAF4-212ENST00000498540 LOXHD1Q8IVV2 1947 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 ERICH2A1L162 156 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 ENPP3O14638 875 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 MEIS2O14770 477 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 ATP9AO75110 1047 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 MARK3P27448 753 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 PPFIA1Q13136 1202 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 CAMK1Q14012 370 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 BTG3Q14201 252 aaPredicted RBP16.94■□□□□ 0.3
TRAF4-212ENST00000498540 TAF2Q6P1X5 1199 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 DNAJB3Q8WWF6 145 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 LINC01599Q8WXQ3 324 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 IGFLR1Q9H665 355 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 ALG13Q9NP73 1137 aaKnown RBP16.94■□□□□ 0.3
TRAF4-212ENST00000498540 TUBE1Q9UJT0 475 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 TECTAO75443 2155 aa16.94■□□□□ 0.3
TRAF4-212ENST00000498540 MMP1P03956 469 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 KCNA2P16389 499 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 PTH1RQ03431 593 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 SMAD4Q13485 552 aaKnown RBP16.93■□□□□ 0.3
TRAF4-212ENST00000498540 AAMPQ13685 434 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 GRIK4Q16099 956 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 FBXO47Q5MNV8 452 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 MARCH8Q5T0T0 291 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 XRRA1Q6P2D8 792 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 NLRX1Q86UT6 975 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 ZBTB10Q96DT7 871 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 POP1Q99575 1024 aaKnown RBP16.93■□□□□ 0.3
TRAF4-212ENST00000498540 UPF3BQ9BZI7 483 aaKnown RBP16.93■□□□□ 0.3
TRAF4-212ENST00000498540 KCNH6Q9H252 994 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 AGO3Q9H9G7 860 aaKnown RBP16.93■□□□□ 0.3
TRAF4-212ENST00000498540 CDY2AQ9Y6F7 541 aa16.93■□□□□ 0.3
TRAF4-212ENST00000498540 U3KPZ7 1027 aaPredicted RBP16.93■□□□□ 0.3
TRAF4-212ENST00000498540 GSTTP1A0A1W2PQM5 241 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 MBLAC1A4D2B0 266 aaPredicted RBP16.92■□□□□ 0.3
TRAF4-212ENST00000498540 E7EWF7 191 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 PIK3CDO00329 1044 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 DGKIO75912 1065 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms