RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 LTFP02788 710 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 GNAT1P11488 350 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 CDSNQ15517 529 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 SMAD2Q15796 467 aaKnown RBP5.6□□□□□ -1.51
CBX3-208ENST00000497498 YOD1Q5VVQ6 348 aaPredicted RBP5.6□□□□□ -1.51
CBX3-208ENST00000497498 SLFN13Q68D06 897 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 ARHGEF18Q6ZSZ5 1173 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 NUDT10Q8NFP7 164 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 NUDT11Q96G61 164 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 KCNJ15Q99712 375 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 DSEQ9UL01 958 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 TSC22D4Q9Y3Q8 395 aa5.6□□□□□ -1.51
CBX3-208ENST00000497498 ASXL2Q76L83 1435 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 BLACEA4D250 179 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 B4GALT4O60513 344 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 SOD2P04179 222 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 ZXDAP98168 799 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 IFRD2Q12894 506 aaPredicted RBP5.59□□□□□ -1.51
CBX3-208ENST00000497498 SKIDA1Q1XH10 827 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 PHF19Q5T6S3 580 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 CD276Q5ZPR3 534 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 Q6ZUG5 572 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 DPH6Q7L8W6 267 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.59□□□□□ -1.51
CBX3-208ENST00000497498 CIR1Q86X95 450 aaPredicted RBP5.59□□□□□ -1.51
CBX3-208ENST00000497498 KCND1Q9NSA2 647 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 ZDHHC9Q9Y397 364 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 MSRB2Q9Y3D2 182 aa5.59□□□□□ -1.51
CBX3-208ENST00000497498 PATE3B3GLJ2 98 aa5.58□□□□□ -1.52
CBX3-208ENST00000497498 FAM47E-STBD1D6RA91 191 aa5.58□□□□□ -1.52
CBX3-208ENST00000497498 ENO2P09104 434 aaPredicted RBP5.58□□□□□ -1.52
CBX3-208ENST00000497498 PFKPQ01813 784 aa5.58□□□□□ -1.52
CBX3-208ENST00000497498 KCTD1Q719H9 257 aa5.58□□□□□ -1.52
CBX3-208ENST00000497498 AJUBAQ96IF1 538 aa5.58□□□□□ -1.52
CBX3-208ENST00000497498 PTPN18Q99952 460 aa5.58□□□□□ -1.52
CBX3-208ENST00000497498 MEGF9Q9H1U4 602 aa5.58□□□□□ -1.52
CBX3-208ENST00000497498 IPPKQ9H8X2 491 aa5.58□□□□□ -1.52
CBX3-208ENST00000497498 ZFP69BQ9UJL9 534 aa5.58□□□□□ -1.52
CBX3-208ENST00000497498 ZNF839A8K0R7 811 aa5.57□□□□□ -1.52
CBX3-208ENST00000497498 ACOT7O00154 380 aa5.57□□□□□ -1.52
CBX3-208ENST00000497498 WNT9AO14904 365 aa5.57□□□□□ -1.52
CBX3-208ENST00000497498 SH3RF2Q8TEC5 729 aa5.57□□□□□ -1.52
CBX3-208ENST00000497498 KISS1RQ969F8 398 aaPredicted RBP5.57□□□□□ -1.52
CBX3-208ENST00000497498 WWC2-AS2Q96NR7 200 aa5.57□□□□□ -1.52
CBX3-208ENST00000497498 ALG1Q9BT22 464 aa5.57□□□□□ -1.52
CBX3-208ENST00000497498 SPATA9Q9BWV2 254 aa5.57□□□□□ -1.52
CBX3-208ENST00000497498 KATNBL1Q9H079 304 aa5.57□□□□□ -1.52
CBX3-208ENST00000497498 KLC2Q9H0B6 622 aa5.57□□□□□ -1.52
CBX3-208ENST00000497498 ARHGAP20Q9P2F6 1191 aa5.57□□□□□ -1.52
CBX3-208ENST00000497498 TCRBV5S4A2TA0A5A2 114 aa5.56□□□□□ -1.52
CBX3-208ENST00000497498 AKAP8O43823 692 aaKnown RBP5.56□□□□□ -1.52
CBX3-208ENST00000497498 ADCY3O60266 1144 aa5.56□□□□□ -1.52
CBX3-208ENST00000497498 FBXO21O94952 628 aa5.56□□□□□ -1.52
CBX3-208ENST00000497498 CNOT4O95628 575 aaKnown RBP5.56□□□□□ -1.52
CBX3-208ENST00000497498 IL18BPO95998 194 aa5.56□□□□□ -1.52
CBX3-208ENST00000497498 SCUBE1Q8IWY4 988 aa5.56□□□□□ -1.52
CBX3-208ENST00000497498 STPG3Q8N7X2 389 aa5.56□□□□□ -1.52
CBX3-208ENST00000497498 CDK5RAP1Q96SZ6 601 aaKnown RBP5.56□□□□□ -1.52
CBX3-208ENST00000497498 TRIM55Q9BYV6 548 aa5.56□□□□□ -1.52
CBX3-208ENST00000497498 SEC61A2Q9H9S3 476 aa5.56□□□□□ -1.52
CBX3-208ENST00000497498 JADE2Q9NQC1 790 aa5.56□□□□□ -1.52
CBX3-208ENST00000497498 SLC4A7Q9Y6M7 1214 aa5.56□□□□□ -1.52
CBX3-208ENST00000497498 CSF2RBP32927 897 aa5.55□□□□□ -1.52
CBX3-208ENST00000497498 GLRBP48167 497 aa5.55□□□□□ -1.52
CBX3-208ENST00000497498 PAK1Q13153 545 aa5.55□□□□□ -1.52
CBX3-208ENST00000497498 R3HDM1Q15032 1099 aaKnown RBP5.55□□□□□ -1.52
CBX3-208ENST00000497498 SPATC1Q76KD6 591 aa5.55□□□□□ -1.52
CBX3-208ENST00000497498 MAMDC2Q7Z304 686 aaPredicted RBP5.55□□□□□ -1.52
CBX3-208ENST00000497498 SPRED1Q7Z699 444 aa5.55□□□□□ -1.52
CBX3-208ENST00000497498 RALYLQ86SE5 291 aaKnown RBP5.55□□□□□ -1.52
CBX3-208ENST00000497498 REXO1L1PQ8IX06 675 aa5.55□□□□□ -1.52
CBX3-208ENST00000497498 SH3RF3Q8TEJ3 882 aaPredicted RBP5.55□□□□□ -1.52
CBX3-208ENST00000497498 TRAF6Q9Y4K3 522 aa5.55□□□□□ -1.52
CBX3-208ENST00000497498 H0Y858 1186 aa5.54□□□□□ -1.52
CBX3-208ENST00000497498 AQP7O14520 342 aa5.54□□□□□ -1.52
CBX3-208ENST00000497498 PDPK1O15530 556 aa5.54□□□□□ -1.52
CBX3-208ENST00000497498 ZNF623O75123 536 aa5.54□□□□□ -1.52
CBX3-208ENST00000497498 RBM25P49756 843 aaKnown RBP5.54□□□□□ -1.52
CBX3-208ENST00000497498 DBPQ10586 325 aaPredicted RBP5.54□□□□□ -1.52
CBX3-208ENST00000497498 RASGRF1Q13972 1273 aa5.54□□□□□ -1.52
CBX3-208ENST00000497498 CKAP2LQ8IYA6 745 aa5.54□□□□□ -1.52
CBX3-208ENST00000497498 Q8TCH9 128 aa5.54□□□□□ -1.52
CBX3-208ENST00000497498 PTPRN2Q92932 1015 aa5.54□□□□□ -1.52
CBX3-208ENST00000497498 CD244Q9BZW8 370 aa5.54□□□□□ -1.52
CBX3-208ENST00000497498 CCDC113Q9H0I3 377 aa5.54□□□□□ -1.52
CBX3-208ENST00000497498 SRPK3Q9UPE1 567 aa5.54□□□□□ -1.52
CBX3-208ENST00000497498 STK10O94804 968 aaKnown RBP5.53□□□□□ -1.52
CBX3-208ENST00000497498 C6orf222P0C671 652 aaPredicted RBP5.53□□□□□ -1.52
CBX3-208ENST00000497498 SELENOPP49908 381 aa5.53□□□□□ -1.52
CBX3-208ENST00000497498 GPR19Q15760 415 aa5.53□□□□□ -1.52
CBX3-208ENST00000497498 NBPF6Q5VWK0 638 aa5.53□□□□□ -1.52
CBX3-208ENST00000497498 ZNF585AQ6P3V2 769 aa5.53□□□□□ -1.52
CBX3-208ENST00000497498 ARHGAP36Q6ZRI8 547 aa5.53□□□□□ -1.52
CBX3-208ENST00000497498 NLGN4XQ8N0W4 816 aa5.53□□□□□ -1.52
CBX3-208ENST00000497498 ZBTB38Q8NAP3 1195 aaPredicted RBP5.53□□□□□ -1.52
CBX3-208ENST00000497498 SLC16A11Q8NCK7 471 aa5.53□□□□□ -1.52
CBX3-208ENST00000497498 PCDH19Q8TAB3 1148 aa5.53□□□□□ -1.52
CBX3-208ENST00000497498 NBPF4Q96M43 638 aa5.53□□□□□ -1.52
CBX3-208ENST00000497498 TACO1Q9BSH4 297 aaKnown RBP5.53□□□□□ -1.52
CBX3-208ENST00000497498 SEMA4AQ9H3S1 761 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms