RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 HIC1Q14526 733 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 MBTPS1Q14703 1052 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 TCTN1Q2MV58 587 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 KRT40Q6A162 431 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 SPRED2Q7Z698 418 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 TMCO2Q7Z6W1 182 aaPredicted RBP9.87□□□□□ -0.83
PRKCB-208ENST00000487674 CATIPQ7Z7H3 387 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 FCHSD1Q86WN1 690 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 INPP4AQ96PE3 977 aaPredicted RBP9.87□□□□□ -0.83
PRKCB-208ENST00000487674 KCNK17Q96T54 332 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 RAD9AQ99638 391 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 MLXIPQ9HAP2 919 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 SENP2Q9HC62 589 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 TAF6LQ9Y6J9 622 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 DOCK5Q9H7D0 1870 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 BRWD1Q9NSI6 2320 aa9.87□□□□□ -0.83
PRKCB-208ENST00000487674 C17orf102A2RUQ5 167 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 H3BRB1 525 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 FIBPO43427 364 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 CAND2O75155 1236 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 DDAH1O94760 285 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 SMIM10L2AP0DMW4 78 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 SMIM10L2BP0DMW5 78 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 ICAM3P32942 547 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 THPOP40225 353 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 KCNQ1P51787 676 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 ANTXR2P58335 489 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 NEDD9Q14511 834 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 METTL7BQ6UX53 244 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 MB21D2Q8IYB1 491 aaPredicted RBP9.86□□□□□ -0.83
PRKCB-208ENST00000487674 GDPD5Q8WTR4 605 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 GPKOWQ92917 476 aaPredicted RBP eCLIP9.86□□□□□ -0.83
PRKCB-208ENST00000487674 NECAB3Q96P71 396 aaPredicted RBP9.86□□□□□ -0.83
PRKCB-208ENST00000487674 TGS1Q96RS0 853 aaKnown RBP9.86□□□□□ -0.83
PRKCB-208ENST00000487674 MAP3K14Q99558 947 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 SPZ1Q9BXG8 430 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 USP26Q9BXU7 913 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 TUT1Q9H6E5 874 aaKnown RBP9.86□□□□□ -0.83
PRKCB-208ENST00000487674 LMCD1Q9NZU5 365 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 REV3LO60673 3130 aa9.86□□□□□ -0.83
PRKCB-208ENST00000487674 LINC01553A4QN01 128 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 RSPH10B2B2RC85 870 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 SPATA31C2B4DYI2 1134 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 AMHP03971 560 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 RSPH10BP0C881 870 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 KIF5BP33176 963 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 ERVK-21P61565 698 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 MRPS9P82933 396 aaKnown RBP9.85□□□□□ -0.83
PRKCB-208ENST00000487674 PLEKHG4Q58EX7 1191 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 XRRA1Q6P2D8 792 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 ZNF654Q8IZM8 581 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 CTCFLQ8NI51 663 aaPredicted RBP9.85□□□□□ -0.83
PRKCB-208ENST00000487674 IGDCC4Q8TDY8 1250 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 ATP6V0A1Q93050 837 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 HLA-CQ95604 372 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 RRP36Q96EU6 259 aaKnown RBP9.85□□□□□ -0.83
PRKCB-208ENST00000487674 MTA3Q9BTC8 594 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 LY9Q9HBG7 655 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 SEC63Q9UGP8 760 aaKnown RBP9.85□□□□□ -0.83
PRKCB-208ENST00000487674 ZNF215Q9UL58 517 aaPredicted RBP9.85□□□□□ -0.83
PRKCB-208ENST00000487674 MTUS1Q9ULD2 1270 aa9.85□□□□□ -0.83
PRKCB-208ENST00000487674 PIK3CDO00329 1044 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 GNAT1P11488 350 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 COL9A1P20849 921 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 SMARCA1P28370 1054 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 HTRA4P83105 476 aaPredicted RBP9.84□□□□□ -0.83
PRKCB-208ENST00000487674 SEMA3FQ13275 785 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 PCNX4Q63HM2 1172 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 CYFIP1Q7L576 1253 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 TRIM50Q86XT4 487 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 DBF4BQ8NFT6 615 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 SMARCC2Q8TAQ2 1214 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 OXER1Q8TDS5 423 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 PIBF1Q8WXW3 757 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 MAP4K1Q92918 833 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 CUL5Q93034 780 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 GPR20Q99678 358 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 SENP7Q9BQF6 1050 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 LZTS2Q9BRK4 669 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 SUGCTQ9HAC7 445 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 INSL6Q9Y581 213 aa9.84□□□□□ -0.83
PRKCB-208ENST00000487674 RBM8AQ9Y5S9 174 aaKnown RBP9.84□□□□□ -0.83
PRKCB-208ENST00000487674 XIRP2A4UGR9 3374 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 RALGAPA2Q2PPJ7 1873 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 NLRC5Q86WI3 1866 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 TREHO43280 583 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 PRC1O43663 620 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 CTSHP09668 335 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 GNAQP50148 359 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 FAM117BQ6P1L5 589 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 CASC1Q6TDU7 716 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.83□□□□□ -0.843e-11■■□□□ 13.5
PRKCB-208ENST00000487674 NLRX1Q86UT6 975 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 MYOCDQ8IZQ8 938 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 GIMAP8Q8ND71 665 aaPredicted RBP9.83□□□□□ -0.84
PRKCB-208ENST00000487674 LMBR1Q8WVP7 490 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 SEPT8Q92599 483 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 MYL10Q9BUA6 226 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 C1QTNF1Q9BXJ1 281 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 RNPEPQ9H4A4 650 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms