RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 BPIP17213 487 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 ARL4AP40617 200 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 CTSWP56202 376 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 RPL11P62913 178 aaKnown RBP3.32□□□□□ -1.88
ITGB1-213ENST00000484088 SEC23AQ15436 765 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 CR1LQ2VPA4 569 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 TMEM177Q53S58 311 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 EMC4Q5J8M3 183 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 CDCA2Q69YH5 1023 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-213ENST00000484088 WWC2Q6AWC2 1192 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 MIB1Q86YT6 1006 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 ZDHHC14Q8IZN3 488 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 LZTR1Q8N653 840 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 IGSF22Q8N9C0 903 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.32□□□□□ -1.88
ITGB1-213ENST00000484088 CPA5Q8WXQ8 436 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 GORASP1Q9BQQ3 440 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 SSBP3Q9BWW4 388 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-213ENST00000484088 PDGFDQ9GZP0 370 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-213ENST00000484088 TMX1Q9H3N1 280 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 CAAP1Q9H8G2 361 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 LUC7LQ9NQ29 371 aaKnown RBP3.32□□□□□ -1.88
ITGB1-213ENST00000484088 CCDC66A2RUB6 948 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 ZNF891A8MT65 544 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-213ENST00000484088 C22orf46C9J442 243 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 MAN2B1O00754 1011 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 DVL2O14641 736 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 OPA1O60313 960 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 NOBOXO60393 691 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 NPHS1O60500 1241 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 KPNA6O60684 536 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 TADA3O75528 432 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 NPTXRO95502 500 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 FUCA1P04066 466 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 JAM2P57087 298 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 DHCR24Q15392 516 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 RNF187Q5TA31 235 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-213ENST00000484088 PIK3R6Q5UE93 754 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 CNNM4Q6P4Q7 775 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 C16orf59Q7L2K0 433 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 OTOP3Q7RTS5 596 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 MTDHQ86UE4 582 aaKnown RBP3.31□□□□□ -1.88
ITGB1-213ENST00000484088 PROSER1Q86XN7 944 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 DDX42Q86XP3 938 aaKnown RBP eCLIP3.31□□□□□ -1.88
ITGB1-213ENST00000484088 NOSTRINQ8IVI9 506 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 PPM1KQ8N3J5 372 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 NETO2Q8NC67 525 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 SMARCC2Q8TAQ2 1214 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 SPATA25Q9BR10 227 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 RNF38Q9H0F5 515 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 SLKQ9H2G2 1235 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-213ENST00000484088 ZCCHC4Q9H5U6 513 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 CLDND1Q9NY35 253 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 MARCH2Q9P0N8 246 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 SAMD15Q9P1V8 674 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 B4GALT6Q9UBX8 382 aa3.31□□□□□ -1.88
ITGB1-213ENST00000484088 PHLDB1Q86UU1 1377 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 M0R2C6 588 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 NEMP1O14524 444 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 TGM5O43548 720 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 CLSTN1O94985 981 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 F2P00734 622 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 SRGAP2CP0DJJ0 459 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 COL6A2P12110 1019 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 NCAM1P13591 858 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 PDE6AP16499 860 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 ATP2A2P16615 1042 aaKnown RBP3.3□□□□□ -1.88
ITGB1-213ENST00000484088 ID4P47928 161 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 SLC6A11P48066 632 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 GTF2A2P52657 109 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 EPHA5P54756 1037 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 CACNB2Q08289 660 aaPredicted RBP3.3□□□□□ -1.88
ITGB1-213ENST00000484088 ADAM9Q13443 819 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 HHIPL2Q6UWX4 724 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 CEP68Q76N32 757 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 STK32CQ86UX6 486 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 KIF18BQ86Y91 864 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 PRPF38AQ8NAV1 312 aaKnown RBP3.3□□□□□ -1.88
ITGB1-213ENST00000484088 SMC1BQ8NDV3 1235 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 UHMK1Q8TAS1 419 aaKnown RBP3.3□□□□□ -1.88
ITGB1-213ENST00000484088 CXorf38Q8TB03 319 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 PIP4K2CQ8TBX8 421 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 CHAC2Q8WUX2 184 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 FBXW5Q969U6 566 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 RELTQ969Z4 430 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 DDX11Q96FC9 970 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 TMEM169Q96HH4 297 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 RBM15Q96T37 977 aaKnown RBP eCLIP3.3□□□□□ -1.88
ITGB1-213ENST00000484088 ALG1Q9BT22 464 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 SLC6A20Q9NP91 592 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 RBPJLQ9UBG7 517 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 JAG2Q9Y219 1238 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 ATP8A1Q9Y2Q0 1164 aa3.3□□□□□ -1.88
ITGB1-213ENST00000484088 NOP58Q9Y2X3 529 aaKnown RBP3.3□□□□□ -1.88
ITGB1-213ENST00000484088 FAM47E-STBD1D6RA91 191 aa3.29□□□□□ -1.88
ITGB1-213ENST00000484088 RFXAPO00287 272 aa3.29□□□□□ -1.88
ITGB1-213ENST00000484088 MYO1BO43795 1136 aa3.29□□□□□ -1.88
ITGB1-213ENST00000484088 COL6A1P12109 1028 aa3.29□□□□□ -1.88
ITGB1-213ENST00000484088 NAT1P18440 290 aa3.29□□□□□ -1.88
ITGB1-213ENST00000484088 ADCYAP1R1P41586 468 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms