RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ZNF227Q86WZ6 799 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 SNX32Q86XE0 403 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 PTRH1Q86Y79 214 aaKnown RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 NXPE1Q8N323 547 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 CAMKK1Q8N5S9 505 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 DIO2Q92813 273 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 NELL1Q92832 810 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 GAL3ST3Q96A11 431 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 TRIM11Q96F44 468 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 CCDC34Q96HJ3 373 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 ZMAT2Q96NC0 199 aaKnown RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 ZIC5Q96T25 663 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 ACO2Q99798 780 aaKnown RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 TREX2Q9BQ50 279 aaPredicted RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 TTLL2Q9BWV7 592 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 SGPP1Q9BX95 441 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 GSX2Q9BZM3 304 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 GBP3Q9H0R5 595 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 PRKRIP1Q9H875 184 aaPredicted RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 CD248Q9HCU0 757 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 ANKEF1Q9NU02 776 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 C14orf119Q9NWQ9 140 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 RTEL1Q9NZ71 1219 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 REV1Q9UBZ9 1251 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 PPP1R9AQ9ULJ8 1098 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 TMCC3Q9ULS5 477 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 MAGED1Q9Y5V3 778 aaPredicted RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 SNX5Q9Y5X3 404 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 IGF1RP08069 1367 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 PARD3Q8TEW0 1356 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 DISP2A7MBM2 1401 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 TRAPPC8Q9Y2L5 1435 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 UHRF1BP1LA0JNW5 1464 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 FANCAO15360 1455 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 SPTAN1Q13813 2472 aaKnown RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 COL4A3Q01955 1670 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 PBRM1Q86U86 1689 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 BPTFQ12830 3046 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 REV3LO60673 3130 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 H3BML4 177 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 PDE2AO00408 941 aaPredicted RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 FOXN3O00409 490 aaPredicted RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ADAMTS3O15072 1205 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 IRAK2O43187 625 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TLL1O43897 1013 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ZBED4O75132 1171 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TIPRLO75663 272 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TUSC2O75896 110 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 CRTAMO95727 393 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 EPHX1P07099 455 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TPM2P07951 284 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 POU2F2P09086 479 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 PARP1P09874 1014 aaKnown RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 RARAP10276 462 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 RAC2P15153 192 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 PLCG1P19174 1290 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ITGA6P23229 1130 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 HOXC12P31275 282 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 HOXC13P31276 330 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TECP42680 631 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ZNF157P51786 506 aaPredicted RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ADKP55263 362 aaKnown RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 SNX16P57768 344 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 MAP2K1Q02750 393 aaPredicted RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 PLAURQ03405 335 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TYRO3Q06418 890 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ZNF252P-AS1Q0IIN9 211 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 MAP4K2Q12851 820 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 AP3B2Q13367 1082 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 LRRC32Q14392 662 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ACAP2Q15057 778 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 LLGL1Q15334 1064 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 CLUL1Q15846 466 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 DDB1Q16531 1140 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 RILPL1Q5EBL4 403 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 FKBP15Q5T1M5 1219 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 RASIP1Q5U651 963 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 RNF220Q5VTB9 566 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 SPOCD1Q6ZMY3 1216 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 NEK10Q6ZWH5 1172 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 C7orf61Q8IZ16 206 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TEX9Q8N6V9 391 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ARL10Q8N8L6 244 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 PCYOX1LQ8NBM8 494 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 ZBTB34Q8NCN2 500 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TRAPPC12Q8WVT3 735 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 BRI3BPQ8WY22 251 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 BSNDQ8WZ55 320 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 SLC5A5Q92911 643 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 HPS3Q969F9 1004 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TBC1D31Q96DN5 1066 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 RCC1LQ96I51 464 aaKnown RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 HIC2Q96JB3 615 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TIGD1Q96MW7 591 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 RMDN3Q96TC7 470 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 NELL2Q99435 816 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 HAUS7Q99871 368 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 PDGFDQ9GZP0 370 aaPredicted RBP3.32□□□□□ -1.88
HMGN4-202ENST00000477243 CCDC68Q9H2F9 335 aa3.32□□□□□ -1.88
HMGN4-202ENST00000477243 TRIT1Q9H3H1 467 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms