RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 MFAP1P55081 439 aaKnown RBP21.99■■□□□ 1.11
NCKIPSD-209ENST00000470006 ZXDAP98168 799 aa21.99■■□□□ 1.11
NCKIPSD-209ENST00000470006 FAM26DQ5JW98 314 aa21.99■■□□□ 1.11
NCKIPSD-209ENST00000470006 ENAHQ8N8S7 591 aaPredicted RBP21.99■■□□□ 1.11
NCKIPSD-209ENST00000470006 CLP1Q92989 425 aaKnown RBP21.99■■□□□ 1.11
NCKIPSD-209ENST00000470006 RILPL2Q969X0 211 aa21.99■■□□□ 1.11
NCKIPSD-209ENST00000470006 PLVAPQ9BX97 442 aa21.99■■□□□ 1.11
NCKIPSD-209ENST00000470006 ZDBF2Q9HCK1 2354 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 CHRNA1P02708 482 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 LINC00271P0C7V0 271 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 SP4Q02446 784 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 TCF15Q12870 199 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 NEDD9Q14511 834 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 TRIM50Q86XT4 487 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 HOMER1Q86YM7 354 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 STAG2Q8N3U4 1231 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 FBXL6Q8N531 539 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 PLAGL2Q9UPG8 496 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 SUPT16HQ9Y5B9 1047 aaKnown RBP21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 ZFHX2Q9C0A1 2572 aaPredicted RBP21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 SALL3Q9BXA9 1300 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 DOCK5Q9H7D0 1870 aa21.98■■□□□ 1.11
NCKIPSD-209ENST00000470006 KLRF2D3W0D1 207 aa21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 ENPP3O14638 875 aa21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 ZBTB5O15062 677 aa21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 PDE1AP54750 535 aa21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 RRP1P56182 461 aaKnown RBP21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 RBM23Q86U06 439 aaKnown RBP21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 RSPH3Q86UC2 560 aa21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 SAMD3Q8N6K7 520 aa21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 LMBR1Q8WVP7 490 aa21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 ATOH1Q92858 354 aaPredicted RBP21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 MSLNLQ96KJ4 702 aa21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 UBAC1Q9BSL1 405 aa21.97■■□□□ 1.11
NCKIPSD-209ENST00000470006 PPP1R11O60927 126 aaPredicted RBP21.96■■□□□ 1.11
NCKIPSD-209ENST00000470006 EYA4O95677 639 aa21.96■■□□□ 1.11
NCKIPSD-209ENST00000470006 NT5C2P49902 561 aa21.96■■□□□ 1.11
NCKIPSD-209ENST00000470006 GHRHRQ02643 423 aa21.96■■□□□ 1.11
NCKIPSD-209ENST00000470006 METTL7BQ6UX53 244 aa21.96■■□□□ 1.11
NCKIPSD-209ENST00000470006 RPGRIP1Q96KN7 1286 aa21.96■■□□□ 1.11
NCKIPSD-209ENST00000470006 GPR20Q99678 358 aa21.96■■□□□ 1.11
NCKIPSD-209ENST00000470006 RTEL1Q9NZ71 1219 aa21.96■■□□□ 1.11
NCKIPSD-209ENST00000470006 ZSWIM5Q9P217 1185 aa21.96■■□□□ 1.11
NCKIPSD-209ENST00000470006 CFAP54Q96N23 3096 aa21.95■■□□□ 1.11
NCKIPSD-209ENST00000470006 NRIP1P48552 1158 aa21.95■■□□□ 1.1
NCKIPSD-209ENST00000470006 LPIN1Q14693 890 aa21.95■■□□□ 1.1
NCKIPSD-209ENST00000470006 IFIT1BQ5T764 474 aaKnown RBP21.95■■□□□ 1.1
NCKIPSD-209ENST00000470006 ADGRD2Q7Z7M1 963 aa21.95■■□□□ 1.1
NCKIPSD-209ENST00000470006 EFHBQ8N7U6 833 aa21.95■■□□□ 1.1
NCKIPSD-209ENST00000470006 CLEC1BQ9P126 229 aa21.95■■□□□ 1.1
NCKIPSD-209ENST00000470006 NRCAMQ92823 1304 aa21.95■■□□□ 1.1
NCKIPSD-209ENST00000470006 LOC730098B7Z3J9 87 aa21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 DGKIO75912 1065 aa21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 TRAF1Q13077 416 aa21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 CAMK1Q14012 370 aa21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 PAN2Q504Q3 1202 aaKnown RBP21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 RUFY4Q6ZNE9 571 aa21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 SMRP1Q8NCR6 262 aa21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 MICAL1Q8TDZ2 1067 aa21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 P2RX5Q93086 422 aa21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 ZNF689Q96CS4 500 aaPredicted RBP21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 RC3H2Q9HBD1 1191 aaKnown RBP21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 BARX2Q9UMQ3 279 aaPredicted RBP21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 USP15Q9Y4E8 981 aaPredicted RBP21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 MRPL42Q9Y6G3 142 aaKnown RBP21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 TTC3P53804 2025 aa21.94■■□□□ 1.1
NCKIPSD-209ENST00000470006 PPFIA3O75145 1194 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 ITGB1P05556 798 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 IBSPP21815 317 aaPredicted RBP21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 DNAJB1P25685 340 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 SIGLEC14Q08ET2 396 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 COASYQ13057 564 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 TAF2Q6P1X5 1199 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 TICAM2Q86XR7 235 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 KLHL23Q8NBE8 558 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 SPPL3Q8TCT6 385 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 POF1BQ8WVV4 589 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 IRF2BPLQ9H1B7 796 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 EHMT1Q9H9B1 1298 aa21.93■■□□□ 1.1
NCKIPSD-209ENST00000470006 KMT2EQ8IZD2 1858 aa21.92■■□□□ 1.1
NCKIPSD-209ENST00000470006 SPATA31C2B4DYI2 1134 aa21.92■■□□□ 1.1
NCKIPSD-209ENST00000470006 FIBPO43427 364 aa21.92■■□□□ 1.1
NCKIPSD-209ENST00000470006 STAM2O75886 525 aa21.92■■□□□ 1.1
NCKIPSD-209ENST00000470006 VCPP55072 806 aaKnown RBP21.92■■□□□ 1.1
NCKIPSD-209ENST00000470006 ADAM17P78536 824 aa21.92■■□□□ 1.1
NCKIPSD-209ENST00000470006 NAALADL2Q58DX5 795 aa21.92■■□□□ 1.1
NCKIPSD-209ENST00000470006 PHF7Q9BWX1 381 aaPredicted RBP21.92■■□□□ 1.1
NCKIPSD-209ENST00000470006 KRT23Q9C075 422 aa21.92■■□□□ 1.1
NCKIPSD-209ENST00000470006 TLE6Q9H808 572 aa21.92■■□□□ 1.1
NCKIPSD-209ENST00000470006 BAZ2BQ9UIF8 2168 aaKnown RBP21.92■■□□□ 1.1
NCKIPSD-209ENST00000470006 ICAM3P32942 547 aa21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 MRPS9P82933 396 aaKnown RBP21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 PPFIA1Q13136 1202 aa21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 IMMTQ16891 758 aaKnown RBP21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 TSHZ1Q6ZSZ6 1077 aa21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 ZBTB33Q86T24 672 aa21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 CMTR2Q8IYT2 770 aaKnown RBP21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 DNAJB3Q8WWF6 145 aa21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 MTMR8Q96EF0 704 aa21.91■■□□□ 1.1
NCKIPSD-209ENST00000470006 PIGSQ96S52 555 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms