RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 STAM2O75886 525 aa21.79■■□□□ 1.08
USP11-205ENST00000467378 CABYRO75952 493 aa21.79■■□□□ 1.08
USP11-205ENST00000467378 TNFAIP2Q03169 654 aa21.79■■□□□ 1.08
USP11-205ENST00000467378 TMEM63BQ5T3F8 832 aa21.79■■□□□ 1.08
USP11-205ENST00000467378 CRYGNQ8WXF5 182 aa21.79■■□□□ 1.08
USP11-205ENST00000467378 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.79■■□□□ 1.08
USP11-205ENST00000467378 B4GALT4O60513 344 aa21.78■■□□□ 1.08
USP11-205ENST00000467378 MMP1P03956 469 aa21.78■■□□□ 1.08
USP11-205ENST00000467378 SMPD1P17405 629 aa21.78■■□□□ 1.08
USP11-205ENST00000467378 GJB2P29033 226 aa21.78■■□□□ 1.08
USP11-205ENST00000467378 SREBF1P36956 1147 aa21.78■■□□□ 1.08
USP11-205ENST00000467378 FOSBP53539 338 aa21.78■■□□□ 1.08
USP11-205ENST00000467378 SEPT14Q6ZU15 432 aa21.78■■□□□ 1.08
USP11-205ENST00000467378 OXER1Q8TDS5 423 aa21.78■■□□□ 1.08
USP11-205ENST00000467378 ARNTL2Q8WYA1 636 aa21.78■■□□□ 1.08
USP11-205ENST00000467378 RTEL1Q9NZ71 1219 aa21.78■■□□□ 1.08
USP11-205ENST00000467378 GNEQ9Y223 722 aaKnown RBP21.78■■□□□ 1.08
USP11-205ENST00000467378 COL4A4P53420 1690 aaPredicted RBP21.78■■□□□ 1.08
USP11-205ENST00000467378 DOCK5Q9H7D0 1870 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 EPOPA6NHQ4 379 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 NKX3-2P78367 333 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 TRIM29Q14134 588 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 TTLL4Q14679 1199 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 CCDC62Q6P9F0 684 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 TLK2Q86UE8 772 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 SCFD2Q8WU76 684 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 C8orf76Q96K31 380 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 INPP4AQ96PE3 977 aaPredicted RBP21.77■■□□□ 1.08
USP11-205ENST00000467378 WDR11Q9BZH6 1224 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 AP5M1Q9H0R1 490 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 SMC3Q9UQE7 1217 aa21.77■■□□□ 1.08
USP11-205ENST00000467378 GRIN2DO15399 1336 aa21.77■■□□□ 1.07
USP11-205ENST00000467378 EDIL3O43854 480 aa21.76■■□□□ 1.07
USP11-205ENST00000467378 ZEB2O60315 1214 aa21.76■■□□□ 1.07
USP11-205ENST00000467378 ARIH2O95376 493 aa21.76■■□□□ 1.07
USP11-205ENST00000467378 CYP3A4P08684 503 aa21.76■■□□□ 1.07
USP11-205ENST00000467378 ARHGAP4P98171 946 aa21.76■■□□□ 1.07
USP11-205ENST00000467378 FSCN1Q16658 493 aaKnown RBP21.76■■□□□ 1.07
USP11-205ENST00000467378 DUSP28Q4G0W2 176 aa21.76■■□□□ 1.07
USP11-205ENST00000467378 DEFB128Q7Z7B8 93 aa21.76■■□□□ 1.07
USP11-205ENST00000467378 HSCBQ8IWL3 235 aa21.76■■□□□ 1.07
USP11-205ENST00000467378 FBXO18Q8NFZ0 1043 aa21.76■■□□□ 1.07
USP11-205ENST00000467378 INTS4Q96HW7 963 aaKnown RBP21.76■■□□□ 1.07
USP11-205ENST00000467378 SEZ6LQ9BYH1 1024 aa21.76■■□□□ 1.07
USP11-205ENST00000467378 UBIAD1Q9Y5Z9 338 aa21.76■■□□□ 1.07
USP11-205ENST00000467378 TXNP10599 105 aaKnown RBP21.75■■□□□ 1.07
USP11-205ENST00000467378 ITGB5P18084 799 aa21.75■■□□□ 1.07
USP11-205ENST00000467378 PTGS1P23219 599 aa21.75■■□□□ 1.07
USP11-205ENST00000467378 ICAM3P32942 547 aa21.75■■□□□ 1.07
USP11-205ENST00000467378 KRT2P35908 639 aa21.75■■□□□ 1.07
USP11-205ENST00000467378 PSMC6P62333 389 aa21.75■■□□□ 1.07
USP11-205ENST00000467378 GUCY1B3Q02153 619 aa21.75■■□□□ 1.07
USP11-205ENST00000467378 TNFRSF25Q93038 417 aa21.75■■□□□ 1.07
USP11-205ENST00000467378 DDX41Q9UJV9 622 aaKnown RBP21.75■■□□□ 1.07
USP11-205ENST00000467378 Q9Y3F1 56 aa21.75■■□□□ 1.07
USP11-205ENST00000467378 BRWD1Q9NSI6 2320 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 BTBD18B2RXH4 712 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 PI4K2BG5E9Z4 385 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 PFKMP08237 780 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 SEMA3FQ13275 785 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 NR5A1Q13285 461 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 LY6KQ17RY6 165 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 GNPTABQ3T906 1256 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 KCNV1Q6PIU1 500 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 KRT25Q7Z3Z0 450 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 DIS3L2Q8IYB7 885 aaKnown RBP21.74■■□□□ 1.07
USP11-205ENST00000467378 TBCKQ8TEA7 893 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 VWCEQ96DN2 955 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 MXRA8Q9BRK3 442 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 JADE2Q9NQC1 790 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 KIF3AQ9Y496 699 aa21.74■■□□□ 1.07
USP11-205ENST00000467378 SPATA31C2B4DYI2 1134 aa21.73■■□□□ 1.07
USP11-205ENST00000467378 NKRFO15226 690 aaKnown RBP eCLIP21.73■■□□□ 1.07
USP11-205ENST00000467378 DYNC1LI2O43237 492 aaPredicted RBP21.73■■□□□ 1.07
USP11-205ENST00000467378 TGFB3P10600 412 aa21.73■■□□□ 1.07
USP11-205ENST00000467378 ACTN1P12814 892 aa21.73■■□□□ 1.07
USP11-205ENST00000467378 NONOQ15233 471 aaKnown RBP eCLIP21.73■■□□□ 1.07
USP11-205ENST00000467378 EARS2Q5JPH6 523 aaKnown RBP21.73■■□□□ 1.07
USP11-205ENST00000467378 NLRX1Q86UT6 975 aa21.73■■□□□ 1.07
USP11-205ENST00000467378 CYP2W1Q8TAV3 490 aa21.73■■□□□ 1.07
USP11-205ENST00000467378 COPS5Q92905 334 aa21.73■■□□□ 1.07
USP11-205ENST00000467378 GPRASP2Q96D09 838 aa21.73■■□□□ 1.07
USP11-205ENST00000467378 BRMS1Q9HCU9 246 aa21.73■■□□□ 1.07
USP11-205ENST00000467378 MRVI1Q9Y6F6 885 aa21.73■■□□□ 1.07
USP11-205ENST00000467378 PTPRSQ13332 1948 aa21.72■■□□□ 1.07
USP11-205ENST00000467378 FIBPO43427 364 aa21.72■■□□□ 1.07
USP11-205ENST00000467378 USP11P51784 963 aa21.72■■□□□ 1.07
USP11-205ENST00000467378 SP2Q02086 613 aa21.72■■□□□ 1.07
USP11-205ENST00000467378 TAP1Q03518 808 aa21.72■■□□□ 1.07
USP11-205ENST00000467378 CEP55Q53EZ4 464 aa21.72■■□□□ 1.07
USP11-205ENST00000467378 SLC9A7Q96T83 725 aa21.72■■□□□ 1.07
USP11-205ENST00000467378 CD320Q9NPF0 282 aa21.72■■□□□ 1.07
USP11-205ENST00000467378 TANC1Q9C0D5 1861 aa21.71■■□□□ 1.07
USP11-205ENST00000467378 CCDC194A0A1B0GVG4 234 aa21.71■■□□□ 1.07
USP11-205ENST00000467378 KIF28PB7ZC32 967 aa21.71■■□□□ 1.07
USP11-205ENST00000467378 MEIS1O00470 390 aa21.71■■□□□ 1.07
USP11-205ENST00000467378 MAFGO15525 162 aa21.71■■□□□ 1.07
USP11-205ENST00000467378 CYP2C9P11712 490 aa21.71■■□□□ 1.07
USP11-205ENST00000467378 CIITAP33076 1130 aa21.71■■□□□ 1.07
USP11-205ENST00000467378 GRB10Q13322 594 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms