RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 KCNK3O14649 394 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 PPP4CP60510 307 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 KCTD19Q17RG1 926 aaPredicted RBP14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 PPP4R3AQ6IN85 833 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 PROCA1Q8NCQ7 364 aaPredicted RBP14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 NEDD1Q8NHV4 660 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 SCFD2Q8WU76 684 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 GJA10Q969M2 543 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 NEUROG2Q9H2A3 272 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 WNK3Q9BYP7 1800 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 SRRM3A6NNA2 597 aaPredicted RBP14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 BHMG1C9JSJ3 638 aaPredicted RBP14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 SMARCA1P28370 1054 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 MARSP56192 900 aaKnown RBP14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 IFT88Q13099 833 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 HLTFQ14527 1009 aaKnown RBP eCLIP14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 ASIC2Q16515 512 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 RNF187Q5TA31 235 aaPredicted RBP14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 LRIG3Q6UXM1 1119 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 CCDC91Q7Z6B0 441 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 DNAAF5Q86Y56 855 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 NELFCDQ8IXH7 590 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 CEP95Q96GE4 821 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 CEP63Q96MT8 703 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 RIOX1Q9H6W3 641 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 PANK4Q9NVE7 773 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 SRP68Q9UHB9 627 aaKnown RBP14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 MYH4Q9Y623 1939 aa14.26□□□□□ -0.13
PDZRN3-205ENST00000466780 LOC102724159A0A0B4J2E5 919 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 KIF4AO95239 1232 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 ZBTB48P10074 688 aaPredicted RBP14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 HOXA7P31268 230 aaPredicted RBP14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 ACTN3Q08043 901 aaPredicted RBP14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 ZNF844Q08AG5 666 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 PWP2Q15269 919 aaKnown RBP14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 RPS6KA1Q15418 735 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 NBPF5PQ86XG9 351 aaPredicted RBP14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 EIF1ADQ8N9N8 165 aaKnown RBP14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 NLRP3Q96P20 1036 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 RAB34Q9BZG1 259 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 LRRC27Q9C0I9 530 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 CENPHQ9H3R5 247 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 VCPKMTQ9H867 229 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 PPANQ9NQ55 473 aaKnown RBP14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 SLC12A6Q9UHW9 1150 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 GGA2Q9UJY4 613 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 PCDHA2Q9Y5H9 948 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 DDX60LQ5H9U9 1706 aaKnown RBP14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 CES2O00748 559 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 USP11P51784 963 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 PTK2Q05397 1052 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 PTPROQ16827 1216 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 DPY19L2P1Q6NXN4 242 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 C16orf86Q6ZW13 317 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.25□□□□□ -0.133e-8■■■■□ 22.1
PDZRN3-205ENST00000466780 TAF4BQ92750 862 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 HAS1Q92839 578 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 CYFIP2Q96F07 1278 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 SETDB2Q96T68 719 aa14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 FRMPD2Q68DX3 1309 aaPredicted RBP14.25□□□□□ -0.13
PDZRN3-205ENST00000466780 BTNL10A8MVZ5 291 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 BAG3O95817 575 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 ADCY7P51828 1080 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 DDR1Q08345 913 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 ZNF571Q7Z3V5 609 aaPredicted RBP14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 LRRC57Q8N9N7 239 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 AP1M1Q9BXS5 423 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 ATAD5Q96QE3 1844 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 GCOM1H8Y6P7 765 aaPredicted RBP14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 CEP104O60308 925 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 MYZAPP0CAP1 466 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 ACTN1P12814 892 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 FLT3P36888 993 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 CUL1Q13616 776 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 PTF1AQ7RTS3 328 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 IRF2BP2Q7Z5L9 587 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 CCDC13Q8IYE1 715 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 WDR66Q8TBY9 1149 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 SCFD1Q8WVM8 642 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 KCTD10Q9H3F6 313 aa14.24□□□□□ -0.13
PDZRN3-205ENST00000466780 NPHP3-ACAD11A0A0J9YXS1 232 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 SSBP05455 408 aaKnown RBP eCLIP14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 TNNI2P48788 182 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 SEPT2Q15019 361 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 GPATCH11Q8N954 259 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 ACTRT1Q8TDG2 376 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 RTFDC1Q9BY42 306 aaPredicted RBP14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 GOLGA6L10A6NI86 522 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 SART1O43290 800 aaKnown RBP14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 GNA14O95837 355 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 UBE2SQ16763 222 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 QPCTQ16769 361 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 SPRED3Q2MJR0 410 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 BARGINQ6ZT62 677 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 ZC3H3Q8IXZ2 948 aaKnown RBP14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 PBKQ96KB5 322 aa14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 DDX47Q9H0S4 455 aaKnown RBP14.23□□□□□ -0.13
PDZRN3-205ENST00000466780 CNOT8Q9UFF9 292 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms