RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 AMNQ9BXJ7 453 aa13.8□□□□□ -0.2
HCFC1-204ENST00000461098 MLXIPQ9HAP2 919 aa13.8□□□□□ -0.2
HCFC1-204ENST00000461098 MAP3K20Q9NYL2 800 aaKnown RBP13.8□□□□□ -0.2
HCFC1-204ENST00000461098 PLAGL2Q9UPG8 496 aa13.8□□□□□ -0.2
HCFC1-204ENST00000461098 RWDD3Q9Y3V2 267 aa13.8□□□□□ -0.2
HCFC1-204ENST00000461098 CCDC171Q6TFL3 1326 aa13.8□□□□□ -0.2
HCFC1-204ENST00000461098 KIAA1671Q9BY89 1806 aa13.8□□□□□ -0.2
HCFC1-204ENST00000461098 LAMA4Q16363 1823 aa13.79□□□□□ -0.2
HCFC1-204ENST00000461098 KDM4AO75164 1064 aa13.79□□□□□ -0.2
HCFC1-204ENST00000461098 DGKIO75912 1065 aa13.79□□□□□ -0.2
HCFC1-204ENST00000461098 CSPG5O95196 566 aa13.79□□□□□ -0.2
HCFC1-204ENST00000461098 RRP1P56182 461 aaKnown RBP13.79□□□□□ -0.2
HCFC1-204ENST00000461098 MRPS9P82933 396 aaKnown RBP13.79□□□□□ -0.2
HCFC1-204ENST00000461098 TRIM50Q86XT4 487 aa13.79□□□□□ -0.2
HCFC1-204ENST00000461098 LMBR1Q8WVP7 490 aa13.79□□□□□ -0.2
HCFC1-204ENST00000461098 ASIC4Q96FT7 647 aa13.79□□□□□ -0.2
HCFC1-204ENST00000461098 ZSCAN10Q96SZ4 725 aaPredicted RBP13.79□□□□□ -0.2
HCFC1-204ENST00000461098 GPR20Q99678 358 aa13.79□□□□□ -0.2
HCFC1-204ENST00000461098 USP26Q9BXU7 913 aa13.79□□□□□ -0.2
HCFC1-204ENST00000461098 RNF41Q9H4P4 317 aaPredicted RBP13.79□□□□□ -0.2
HCFC1-204ENST00000461098 KAT14Q9H8E8 782 aa13.79□□□□□ -0.2
HCFC1-204ENST00000461098 CACNA1HO95180 2353 aa13.79□□□□□ -0.2
HCFC1-204ENST00000461098 GLP2RO95838 553 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 PARP1P09874 1014 aaKnown RBP13.78□□□□□ -0.2
HCFC1-204ENST00000461098 GHRP10912 638 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 ICAM3P32942 547 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 PDE1AP54750 535 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 VCPP55072 806 aaKnown RBP13.78□□□□□ -0.2
HCFC1-204ENST00000461098 COASYQ13057 564 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 LPIN1Q14693 890 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 PKN1Q16512 942 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 RUFY4Q6ZNE9 571 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 TICAM2Q86XR7 235 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 FBXL6Q8N531 539 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 SAMD3Q8N6K7 520 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 SPPL3Q8TCT6 385 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 LINC01599Q8WXQ3 324 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 PRRX2Q99811 253 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 PLVAPQ9BX97 442 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 ZSWIM5Q9P217 1185 aa13.78□□□□□ -0.2
HCFC1-204ENST00000461098 SPATA31C2B4DYI2 1134 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 B4E1Z4 1266 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 ZBTB5O15062 677 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 DHX16O60231 1041 aaKnown RBP13.77□□□□□ -0.21
HCFC1-204ENST00000461098 ITGB1P05556 798 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 GNAT1P11488 350 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 CCND2P30279 289 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 NDUFV1P49821 464 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 PLXNA3P51805 1871 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 FRMPD4Q14CM0 1322 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 CCDC178Q5BJE1 867 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 METTL7BQ6UX53 244 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 CYFIP1Q7L576 1253 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 RTN4RL1Q86UN2 441 aaPredicted RBP13.77□□□□□ -0.21
HCFC1-204ENST00000461098 IQCA1Q86XH1 822 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 EFHBQ8N7U6 833 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 P2RX5Q93086 422 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 INPP4AQ96PE3 977 aaPredicted RBP13.77□□□□□ -0.21
HCFC1-204ENST00000461098 SPTBN4Q9H254 2564 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 FAM86C1Q9NVL1 165 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 MAD2L2Q9UI95 211 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 PCDHA1Q9Y5I3 950 aa13.77□□□□□ -0.21
HCFC1-204ENST00000461098 MRPL42Q9Y6G3 142 aaKnown RBP13.77□□□□□ -0.21
HCFC1-204ENST00000461098 KLRF2D3W0D1 207 aa13.76□□□□□ -0.21
HCFC1-204ENST00000461098 ZNF213O14771 459 aa13.76□□□□□ -0.21
HCFC1-204ENST00000461098 GFRA3O60609 400 aa13.76□□□□□ -0.21
HCFC1-204ENST00000461098 NT5C2P49902 561 aa13.76□□□□□ -0.21
HCFC1-204ENST00000461098 ARHGAP4P98171 946 aa13.76□□□□□ -0.21
HCFC1-204ENST00000461098 BTG3Q14201 252 aaPredicted RBP13.76□□□□□ -0.21
HCFC1-204ENST00000461098 USP15Q9Y4E8 981 aaPredicted RBP13.76□□□□□ -0.21
HCFC1-204ENST00000461098 PCDHGC5Q9Y5F6 944 aa13.76□□□□□ -0.21
HCFC1-204ENST00000461098 PLXNA4Q9HCM2 1894 aa13.76□□□□□ -0.21
HCFC1-204ENST00000461098 NRCAMQ92823 1304 aa13.75□□□□□ -0.21
HCFC1-204ENST00000461098 NOP56O00567 594 aaKnown RBP13.75□□□□□ -0.21
HCFC1-204ENST00000461098 SIGLEC14Q08ET2 396 aa13.75□□□□□ -0.21
HCFC1-204ENST00000461098 FBXO47Q5MNV8 452 aa13.75□□□□□ -0.21
HCFC1-204ENST00000461098 MARCH8Q5T0T0 291 aa13.75□□□□□ -0.21
HCFC1-204ENST00000461098 ANKRD45Q5TZF3 282 aa13.75□□□□□ -0.21
HCFC1-204ENST00000461098 FCHSD1Q86WN1 690 aa13.75□□□□□ -0.21
HCFC1-204ENST00000461098 SUGP1Q8IWZ8 645 aaKnown RBP13.75□□□□□ -0.21
HCFC1-204ENST00000461098 KLHL23Q8NBE8 558 aa13.75□□□□□ -0.21
HCFC1-204ENST00000461098 AGO3Q9H9G7 860 aaKnown RBP13.75□□□□□ -0.21
HCFC1-204ENST00000461098 BARX2Q9UMQ3 279 aaPredicted RBP13.75□□□□□ -0.21
HCFC1-204ENST00000461098 PALM3A6NDB9 673 aaPredicted RBP13.74□□□□□ -0.21
HCFC1-204ENST00000461098 TRIM6-TRIM34B2RNG4 842 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 GCOM1H8Y6P7 765 aaPredicted RBP13.74□□□□□ -0.21
HCFC1-204ENST00000461098 POLR2MP0CAP2 368 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 AVPR2P30518 371 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 NRIP1P48552 1158 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 RBM10P98175 930 aaKnown RBP13.74□□□□□ -0.21
HCFC1-204ENST00000461098 NEDD9Q14511 834 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 SEC23AQ15436 765 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 NAALADL2Q58DX5 795 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 UTP14CQ5TAP6 766 aaKnown RBP13.74□□□□□ -0.21
HCFC1-204ENST00000461098 RBM23Q86U06 439 aaKnown RBP13.74□□□□□ -0.21
HCFC1-204ENST00000461098 VN1R2Q8NFZ6 395 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 POF1BQ8WVV4 589 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 SUSD6Q92537 303 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 PHF7Q9BWX1 381 aaPredicted RBP13.74□□□□□ -0.21
HCFC1-204ENST00000461098 RIOX1Q9H6W3 641 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms