RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
VPS45-204ENST00000460366 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 MTMR1Q13613 665 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 LY6KQ17RY6 165 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 INF2Q27J81 1249 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 Q4G0T1 1027 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 CELF3Q5SZQ8 465 aaKnown RBP11.28□□□□□ -0.6
VPS45-204ENST00000460366 RNF180Q86T96 592 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 TLK2Q86UE8 772 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 PLA2G4DQ86XP0 818 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 NOSTRINQ8IVI9 506 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 ZFRQ96KR1 1074 aaKnown RBP11.28□□□□□ -0.6
VPS45-204ENST00000460366 KCNH7Q9NS40 1196 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 DNM1LO00429 736 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 ZEB2O60315 1214 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 KPNA6O60684 536 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 KCNA2P16389 499 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 SYT1P21579 422 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 SP2Q02086 613 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 ARHGAP1Q07960 439 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 ORC2Q13416 577 aaPredicted RBP11.27□□□□□ -0.61
VPS45-204ENST00000460366 GNL2Q13823 731 aaKnown RBP11.27□□□□□ -0.61
VPS45-204ENST00000460366 LRRC41Q15345 812 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 BRDTQ58F21 947 aaPredicted RBP11.27□□□□□ -0.61
VPS45-204ENST00000460366 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
VPS45-204ENST00000460366 METTL7BQ6UX53 244 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 DHX37Q8IY37 1157 aaKnown RBP11.27□□□□□ -0.61
VPS45-204ENST00000460366 PCSK9Q8NBP7 692 aaKnown RBP11.27□□□□□ -0.61
VPS45-204ENST00000460366 CYP2W1Q8TAV3 490 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 LENG9Q96B70 501 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 NFASCO94856 1347 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 SYNRGQ9UMZ2 1314 aa11.27□□□□□ -0.61
VPS45-204ENST00000460366 LRRC37A2A6NM11 1700 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 HTTP42858 3142 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 A6NJR5 290 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 TBX3O15119 743 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 CTAGE5O15320 804 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 GGPS1O95749 300 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 PGK1P00558 417 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 ARP10275 920 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 HOXD8P13378 290 aaPredicted RBP11.26□□□□□ -0.61
VPS45-204ENST00000460366 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
VPS45-204ENST00000460366 UBA1P22314 1058 aaKnown RBP11.26□□□□□ -0.61
VPS45-204ENST00000460366 CPT1AP50416 773 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 FSCN1Q16658 493 aaKnown RBP11.26□□□□□ -0.61
VPS45-204ENST00000460366 LETM2Q2VYF4 491 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 PRR16Q569H4 304 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 GNASQ5JWF2 1037 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 TMEM63BQ5T3F8 832 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 ANO1Q5XXA6 986 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 CCSAPQ6IQ19 270 aaPredicted RBP11.26□□□□□ -0.61
VPS45-204ENST00000460366 BRAPQ7Z569 592 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 OR6J1Q8NGC5 347 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 PPTC7Q8NI37 304 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 FAM20AQ96MK3 541 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 AGO4Q9HCK5 861 aaKnown RBP11.26□□□□□ -0.61
VPS45-204ENST00000460366 TBC1D22BQ9NU19 505 aa11.26□□□□□ -0.61
VPS45-204ENST00000460366 DDX25Q9UHL0 483 aaKnown RBP11.26□□□□□ -0.61
VPS45-204ENST00000460366 NOL7Q9UMY1 257 aaKnown RBP11.26□□□□□ -0.61
VPS45-204ENST00000460366 KIAA1217Q5T5P2 1943 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 KIF28PB7ZC32 967 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 KBTBD13C9JR72 458 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 SMAPO00193 183 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 IPO5O00410 1097 aaKnown RBP11.25□□□□□ -0.61
VPS45-204ENST00000460366 STX6O43752 255 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 ATP9AO75110 1047 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 PPFIA4O75335 1185 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 CABYRO75952 493 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 FARP2O94887 1054 aaPredicted RBP11.25□□□□□ -0.61
VPS45-204ENST00000460366 C6orf222P0C671 652 aaPredicted RBP11.25□□□□□ -0.61
VPS45-204ENST00000460366 GJC2Q5T442 439 aaPredicted RBP11.25□□□□□ -0.61
VPS45-204ENST00000460366 MCTP1Q6DN14 999 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 UBE2Q1Q7Z7E8 422 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 PACS2Q86VP3 889 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 COPS5Q92905 334 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 LENG1Q96BZ8 264 aaPredicted RBP11.25□□□□□ -0.61
VPS45-204ENST00000460366 RIT2Q99578 217 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 SDF4Q9BRK5 362 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 MLXIPQ9HAP2 919 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 PHF24Q9UPV7 400 aa11.25□□□□□ -0.61
VPS45-204ENST00000460366 VPS37CA5D8V6 355 aaPredicted RBP11.24□□□□□ -0.61
VPS45-204ENST00000460366 MSH4O15457 936 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 DHX15O43143 795 aaKnown RBP11.24□□□□□ -0.61
VPS45-204ENST00000460366 CCNT1O60563 726 aaKnown RBP11.24□□□□□ -0.61
VPS45-204ENST00000460366 TDP2O95551 362 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 COL6A1P12109 1028 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 ANP32AP39687 249 aaKnown RBP11.24□□□□□ -0.61
VPS45-204ENST00000460366 ITGB3BPQ13352 177 aaPredicted RBP11.24□□□□□ -0.61
VPS45-204ENST00000460366 KCNA10Q16322 511 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 DGKDQ16760 1214 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 RILPL1Q5EBL4 403 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 CYFIP1Q7L576 1253 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 ANKK1Q8NFD2 765 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 ETNPPLQ8TBG4 499 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 AFG1LQ8WV93 481 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 SEPT1Q8WYJ6 367 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 SLC5A5Q92911 643 aa11.24□□□□□ -0.61
VPS45-204ENST00000460366 SPATA33Q96N06 139 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms