RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 ERLIN1O75477 346 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 RAPGEF3O95398 923 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 MAP4K4O95819 1239 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 PENKP01210 267 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 IDO1P14902 403 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 RAG1P15918 1043 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 FERP16591 822 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 CASTP20810 708 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 SYT1P21579 422 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 HOXD10P28358 340 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 TPP2P29144 1249 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 PMLP29590 882 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 STIP1P31948 543 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 FLT3P36888 993 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 LMAN1P49257 510 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 AARSP49588 968 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 USP11P51784 963 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 AFF1P51825 1210 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 PMS1P54277 932 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 PHEXP78562 749 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 NFKB2Q00653 900 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 CUL4AQ13619 759 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 LAMB3Q13751 1172 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 BTG3Q14201 252 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 BBS9Q3SYG4 887 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 TBC1D10BQ4KMP7 808 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 AKAP4Q5JQC9 854 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 FAM209AQ5JX71 171 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 MIS18BP1Q6P0N0 1132 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 CWC27Q6UX04 472 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 RBM43Q6ZSC3 357 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 RSRC2Q7L4I2 434 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 OTUD6AQ7L8S5 288 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 CATIPQ7Z7H3 387 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 TAX1BP1Q86VP1 789 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 PPFIBP1Q86W92 1011 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 SPATS2Q86XZ4 545 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 WDR63Q8IWG1 891 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 TMEM192Q8IY95 271 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 SLFN12Q8IYM2 578 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 B4GALNT2Q8NHY0 566 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 MIPOL1Q8TD10 442 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 RTF1Q92541 710 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 KLHDC7BQ96G42 594 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 DHRS1Q96LJ7 313 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 C16orf45Q96MC5 204 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 ALS2CR12Q96Q35 445 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 PRAM1Q96QH2 718 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 JPH2Q9BR39 696 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 WDR18Q9BV38 432 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 RUSC1Q9BVN2 902 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 UNC45AQ9H3U1 944 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 JADE2Q9NQC1 790 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 RTEL1Q9NZ71 1219 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 SPATA7Q9P0W8 599 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 CORO1CQ9ULV4 474 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 MAPRE3Q9UPY8 281 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 HIF3AQ9Y2N7 669 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 MRPS23Q9Y3D9 190 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 CSADQ9Y600 493 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 CHD2O14647 1828 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 AKAP12Q02952 1782 aa4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 SETD1AO15047 1707 aaKnown RBP4.07□□□□□ -1.76
HMGB3P8-201ENST00000449709 ADGRB2O60241 1585 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 IFT140Q96RY7 1462 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 TTC21BQ7Z4L5 1316 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 EVC2Q86UK5 1308 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 ZNF644Q9H582 1327 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 SETD1BQ9UPS6 1966 aaKnown RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 TRBV23-1A0A0A0MS06 115 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 TRAV20A0A0B4J274 112 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 LOC100289279A0A1B0GTE1 492 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCDC194A0A1B0GVG4 234 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 ANKRD34BA5PLL1 514 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 SRRM3A6NNA2 597 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 ALG1L2C9J202 215 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 RGS13O14921 159 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 FANCGO15287 622 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CYP27B1O15528 508 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 SRGAP3O43295 1099 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 KIF5CO60282 957 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 LILRB5O75023 590 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 AOC2O75106 756 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 RNF8O76064 485 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 TPPPO94811 219 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 DLGAP3O95886 979 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CAPNS1P04632 268 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 NAT2P11245 290 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CYP11B2P19099 503 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 MX1P20591 662 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 PTGS1P23219 599 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 NTF4P34130 210 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 ETF1P62495 437 aaKnown RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 ERVK-24P63145 666 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCZ1BP86790 482 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 CCZ1P86791 482 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 DRP2Q13474 957 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 SNX1Q13596 522 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 MYBPC3Q14896 1274 aa4.06□□□□□ -1.76
HMGB3P8-201ENST00000449709 BRD3Q15059 726 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms