RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 NAT14Q8WUY8 206 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 TLCD1Q96CP7 247 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 MED15Q96RN5 788 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 SYNCQ9H7C4 482 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 RXFP1Q9HBX9 757 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 BTBD7Q9P203 1132 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 USP15Q9Y4E8 981 aaPredicted RBP11.68□□□□□ -0.54
LINC00342-202ENST00000448494 TTI1O43156 1089 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 ECE2O60344 883 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 SUN1O94901 812 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 PABPC4LP0CB38 370 aaKnown RBP11.68□□□□□ -0.54
LINC00342-202ENST00000448494 VAV1P15498 845 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 CTNNA1P35221 906 aaKnown RBP11.68□□□□□ -0.54
LINC00342-202ENST00000448494 MATR3P43243 847 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC00342-202ENST00000448494 CDK7P50613 346 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 PDE6CP51160 858 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 USPL1Q5W0Q7 1092 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 KANK3Q6NY19 840 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 SHC4Q6S5L8 630 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 LRRC34Q8IZ02 419 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 AGGF1Q8N302 714 aaeCLIP11.68□□□□□ -0.54
LINC00342-202ENST00000448494 CHP1Q99653 195 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 DCLRE1BQ9H816 532 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 TIMMDC1Q9NPL8 285 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 NDUFA13Q9P0J0 144 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 CARD8Q9Y2G2 431 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 USH1CQ9Y6N9 552 aa11.68□□□□□ -0.54
LINC00342-202ENST00000448494 TMEM94Q12767 1356 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 MYH13Q9UKX3 1938 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 STRNO43815 780 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 MGEA5O60502 916 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 TACC1O75410 805 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 ATP5HO75947 161 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 NAT2P11245 290 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 CYLC1P35663 651 aaPredicted RBP11.67□□□□□ -0.54
LINC00342-202ENST00000448494 PPARAQ07869 468 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 ITGA9Q13797 1035 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 TSR1Q2NL82 804 aaKnown RBP11.67□□□□□ -0.54
LINC00342-202ENST00000448494 GJC2Q5T442 439 aaPredicted RBP11.67□□□□□ -0.54
LINC00342-202ENST00000448494 ATXN2LQ8WWM7 1075 aaKnown RBP11.67□□□□□ -0.54
LINC00342-202ENST00000448494 CASKIN2Q8WXE0 1202 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 TMEM237Q96Q45 408 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 SRPK1Q96SB4 655 aaKnown RBP11.67□□□□□ -0.54
LINC00342-202ENST00000448494 THAP9Q9H5L6 903 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 PTTG2Q9NZH5 202 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 FAM32AQ9Y421 112 aaKnown RBP11.67□□□□□ -0.54
LINC00342-202ENST00000448494 EID1Q9Y6B2 187 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 RFX7Q2KHR2 1363 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 MED23Q9ULK4 1368 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 SURF6O75683 361 aaKnown RBP11.67□□□□□ -0.54
LINC00342-202ENST00000448494 PYGMP11217 842 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 DHX9Q08211 1270 aaKnown RBP11.67□□□□□ -0.54
LINC00342-202ENST00000448494 R3HDM1Q15032 1099 aaKnown RBP11.67□□□□□ -0.54
LINC00342-202ENST00000448494 SH3D19Q5HYK7 790 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 PHLDB3Q6NSJ2 640 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 USHBP1Q8N6Y0 703 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 DNAJC7Q99615 494 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 CABP1Q9NZU7 370 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
LINC00342-202ENST00000448494 SAP30BPQ9UHR5 308 aaKnown RBP11.67□□□□□ -0.54
LINC00342-202ENST00000448494 CD163L1Q9NR16 1453 aa11.66□□□□□ -0.54
LINC00342-202ENST00000448494 SMIM31A0A1B0GVY4 71 aa11.66□□□□□ -0.54
LINC00342-202ENST00000448494 GSTT2P0CG29 244 aa11.66□□□□□ -0.54
LINC00342-202ENST00000448494 GSTT2BP0CG30 244 aa11.66□□□□□ -0.54
LINC00342-202ENST00000448494 GNAT2P19087 354 aa11.66□□□□□ -0.54
LINC00342-202ENST00000448494 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
LINC00342-202ENST00000448494 FKBP15Q5T1M5 1219 aa11.66□□□□□ -0.54
LINC00342-202ENST00000448494 MARK2Q7KZI7 788 aaKnown RBP11.66□□□□□ -0.54
LINC00342-202ENST00000448494 CASP10Q92851 521 aa11.66□□□□□ -0.54
LINC00342-202ENST00000448494 DDX23Q9BUQ8 820 aaKnown RBP11.66□□□□□ -0.54
LINC00342-202ENST00000448494 RBM12Q9NTZ6 932 aaKnown RBP11.66□□□□□ -0.54
LINC00342-202ENST00000448494 TXLNGQ9NUQ3 528 aa11.66□□□□□ -0.54
LINC00342-202ENST00000448494 TAF6LQ9Y6J9 622 aa11.66□□□□□ -0.54
LINC00342-202ENST00000448494 PCDH11XQ9BZA7 1347 aa11.66□□□□□ -0.54
LINC00342-202ENST00000448494 SART1O43290 800 aaKnown RBP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 SERPINB7O75635 380 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 UNC5CO95185 931 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 GJB6O95452 261 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 SERPINB3P29508 390 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 RGS2P41220 211 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 CUL1Q13616 776 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 TTLL12Q14166 644 aaPredicted RBP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 UAP1Q16222 522 aaPredicted RBP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 UTP4Q969X6 686 aaKnown RBP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 ITPKCQ96DU7 683 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 DUSP9Q99956 384 aaKnown RBP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 NACAP1Q9BZK3 213 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 DRC3Q9H069 523 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 LRMDAQ9H2I8 198 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 DPH5Q9H2P9 285 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 EPB41L1Q9H4G0 881 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 ECHDC1Q9NTX5 307 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 DDX43Q9NXZ2 648 aaKnown RBP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 FBXO9Q9UK97 447 aaPredicted RBP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 KCNH3Q9ULD8 1083 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 ZNF711Q9Y462 761 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 DLG5Q8TDM6 1919 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 LYNP07948 512 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms